Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014636.1 Kokia drynarioides strain JFW-HI SEQ_129675, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  117737

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
891--922
15
2.1
15
100
0
64
18
18
0
62
1.33
4204--4237
17
2.1
16
94
5
59
47
0
0
52
1.00
4227--4264
13
2.9
13
88
0
58
26
2
2
68
1.16
4240--4286
21
2.2
21
85
11
60
34
0
2
63
1.06
4240--4291
20
2.5
20
84
9
61
32
0
1
65
1.04
6484--6533
24
2.1
23
82
10
57
36
2
2
60
1.20
6491--6578
39
2.2
40
82
6
99
40
1
3
54
1.24
7550--8502
318
3.0
318
98
0
1822
37
13
16
33
1.87
9121--9198
39
2.0
41
82
7
99
64
7
1
26
1.29
9372--9424
12
4.4
12
85
0
79
71
18
3
5
1.21
9415--9455
21
1.9
22
85
5
57
68
19
2
9
1.29
9346--9465
24
5.2
23
69
12
68
70
18
3
8
1.27
9458--9494
18
2.1
18
100
0
74
72
10
5
10
1.25
9510--9554
23
1.9
23
86
4
63
73
17
4
4
1.17
16115--16299
90
2.1
90
100
0
370
32
11
4
51
1.58
18406--18434
15
1.9
15
100
0
58
20
37
6
34
1.80
19578--19610
16
2.1
16
88
5
50
57
6
27
9
1.53
23398--23429
8
4.0
8
91
0
55
62
15
12
9
1.54
24102--24136
9
3.9
9
84
0
52
42
22
8
25
1.82
24102--24139
18
2.1
19
90
5
60
44
21
7
26
1.79
24278--24327
20
2.5
20
90
0
82
28
24
0
48
1.52
33152--33187
19
1.9
20
88
11
58
22
0
2
75
0.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40452--40480
13
2.2
13
100
0
58
13
27
6
51
1.66
47181--47255
37
2.1
36
87
2
105
40
10
14
34
1.81
52208--52256
20
2.4
21
80
13
57
51
8
24
16
1.71
59652--59718
18
3.7
18
84
4
82
23
20
22
32
1.98
66709--66779
36
2.0
36
85
0
97
36
14
26
22
1.92
69252--69290
21
1.9
21
89
5
62
74
10
7
7
1.22
76794--76827
9
3.7
9
88
7
50
17
5
5
70
1.28
86817--86884
20
3.3
20
75
22
61
47
1
13
38
1.52
98603--98641
12
3.4
11
85
7
51
25
2
0
71
0.98
99208--99266
25
2.3
27
80
14
70
50
1
0
47
1.11
99641--99672
3
10.7
3
100
0
64
34
34
31
0
1.58
106286--106337
23
2.3
23
83
6
63
34
0
1
63
1.06

Tables:   1

The End!