Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014637.1 Kokia drynarioides strain JFW-HI SEQ_129676, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74895

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
533--574
22
1.9
22
85
9
59
26
4
19
50
1.67
540--580
22
1.9
21
85
5
55
24
7
19
48
1.74
1801--2127
107
3.0
107
95
0
582
43
12
7
36
1.71
7942--8385
232
1.9
233
85
1
622
35
20
16
28
1.94
11046--11149
51
2.0
51
98
0
199
31
17
14
36
1.90
14246--14322
37
2.0
38
92
5
129
31
23
12
32
1.92
16485--17000
275
1.9
278
84
7
699
34
13
11
39
1.81
22138--22180
21
2.2
20
84
15
56
62
0
0
37
0.95
22213--22256
22
2.0
23
81
4
54
52
0
0
47
1.00
24254--24292
20
2.0
20
90
10
62
28
5
5
61
1.39
27779--27877
53
1.9
51
83
4
126
48
11
7
33
1.66
30624--30649
2
13.0
2
100
0
52
50
0
0
50
1.00
37591--37622
17
1.9
17
93
6
57
15
3
0
81
0.82
38012--38068
30
1.9
30
88
0
87
49
3
14
33
1.60
45111--45158
24
2.0
25
91
4
80
39
2
0
58
1.10
52134--52177
16
2.7
15
82
10
52
27
9
15
47
1.76
52266--52330
32
2.0
34
85
11
91
23
9
18
49
1.76
52667--52882
108
2.0
108
93
0
369
25
21
14
37
1.92
55993--56023
16
1.9
16
93
0
53
32
0
0
67
0.91
60515--60881
185
2.0
185
94
0
644
56
7
8
27
1.57
61625--61664
2
20.0
2
100
0
80
50
0
0
50
1.00
66361--66397
18
2.1
18
94
0
65
35
10
5
48
1.61
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67527--67581
25
2.2
26
86
3
76
18
9
7
65
1.44
67527--67588
25
2.4
26
83
2
72
17
8
6
67
1.37
72524--72582
29
2.0
30
86
3
84
40
8
5
45
1.56
74367--74428
30
2.0
31
87
3
90
41
11
1
45
1.50

Tables:   1

The End!