Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014642.1 Kokia drynarioides strain JFW-HI SEQ_129681, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86763

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5080--5109
15
2.0
15
93
0
51
43
6
0
50
1.28
5392--5428
17
2.2
17
95
0
65
40
2
0
56
1.13
5736--5768
17
2.0
17
88
5
50
39
0
0
60
0.97
6642--6702
27
2.1
28
85
8
79
75
3
4
16
1.11
8605--8642
13
2.8
13
92
4
58
57
10
2
28
1.45
8647--8733
44
2.0
44
97
0
165
44
10
19
25
1.82
13963--14121
73
2.2
72
86
5
214
27
18
24
29
1.98
13963--14162
73
2.8
73
81
5
201
27
20
24
28
1.99
18600--18739
69
2.0
68
95
2
262
27
14
31
26
1.94
23485--23521
18
2.1
18
94
0
65
37
18
13
29
1.90
23428--23634
106
2.0
106
98
0
396
33
20
16
28
1.95
23582--23633
18
2.9
17
80
5
59
34
19
19
26
1.95
26255--26298
14
3.2
14
80
3
54
50
15
4
29
1.64
26927--27050
63
2.0
63
82
3
151
32
18
16
32
1.94
28093--28160
26
2.6
26
81
6
66
25
33
19
22
1.97
33648--33728
26
3.1
25
79
8
99
67
6
2
23
1.25
36660--36708
26
1.9
26
87
4
73
65
8
10
16
1.46
37444--37573
3
42.7
3
77
13
106
67
5
3
23
1.26
37391--37567
83
2.1
83
92
4
295
68
6
4
20
1.30
37566--37693
3
42.7
3
93
3
222
66
31
0
2
1.04
39392--39432
11
3.8
11
83
3
57
75
0
0
24
0.80
41171--41251
23
3.6
22
86
6
92
39
25
19
14
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41240--41338
23
4.3
23
89
2
137
44
19
25
11
1.83
41169--41338
46
3.7
46
76
8
143
42
21
22
12
1.87
58004--58040
18
2.1
18
89
0
56
24
27
0
48
1.51
61160--61196
18
2.1
18
89
0
56
24
27
0
48
1.51
67070--67218
74
2.0
74
100
0
298
50
5
32
12
1.62
70123--70162
12
3.1
12
86
13
53
0
30
0
70
0.88
71888--71975
46
1.9
46
90
0
140
38
14
20
26
1.91
78238--78333
48
2.0
48
100
0
192
31
29
10
29
1.90
86680--86710
2
15.5
2
100
0
62
51
0
0
48
1.00

Tables:   1

The End!