Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014653.1 Kokia drynarioides strain JFW-HI SEQ_129692, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  120143

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
234--392
41
3.9
41
83
4
176
21
27
16
33
1.95
3933--3971
19
2.1
19
95
0
69
61
10
17
10
1.55
11555--11594
21
1.9
21
100
0
80
25
10
27
37
1.88
16796--16823
13
2.2
13
100
0
56
25
10
7
57
1.58
20089--20139
23
2.2
23
86
13
70
52
29
0
17
1.45
20395--20437
14
3.1
13
81
15
50
76
0
0
23
0.78
23365--23411
22
2.0
24
84
8
62
42
0
4
53
1.20
24150--24179
13
2.2
14
94
5
53
73
0
6
20
1.05
26664--26718
28
2.0
28
85
0
74
27
20
21
30
1.98
27584--27650
20
3.3
20
76
0
62
40
16
22
20
1.91
27839--27899
27
2.3
27
91
2
97
37
21
8
32
1.83
32113--32169
29
2.0
29
92
0
96
24
15
24
35
1.95
38177--38211
18
1.9
18
88
0
52
74
8
14
2
1.17
56587--56626
18
2.3
18
86
4
55
17
15
10
57
1.64
57228--57271
6
7.2
6
90
10
63
79
0
20
0
0.73
57227--57271
20
2.4
19
92
7
74
77
0
22
0
0.76
64935--64967
13
2.8
12
90
9
50
15
0
12
72
1.12
84253--84343
46
2.0
47
88
2
139
3
29
17
49
1.63
95960--96003
18
2.4
18
84
0
61
29
22
20
27
1.99
107198--107291
46
2.0
47
87
6
138
19
10
13
56
1.66
117672--117710
12
3.2
12
88
3
51
74
2
7
15
1.15
117677--117710
17
2.0
17
88
11
52
76
0
5
17
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
119877--119944
15
4.4
15
92
1
91
30
5
35
27
1.81
119929--120022
44
2.1
46
86
7
131
30
6
27
35
1.82

Tables:   1

The End!