Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014666.1 Kokia drynarioides strain JFW-HI SEQ_129705, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  146800

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4038--4164
28
4.6
27
82
3
110
22
14
28
34
1.93
4102--4311
56
3.8
56
74
11
178
22
14
23
39
1.91
4110--4311
28
7.2
28
75
8
155
22
14
22
40
1.91
6149--6199
25
2.0
25
100
0
102
31
17
27
23
1.97
10566--10605
21
1.9
21
90
10
64
27
27
7
37
1.84
11361--11484
50
2.5
50
88
2
178
39
12
12
34
1.82
15522--15561
3
13.3
3
100
0
80
65
0
0
35
0.93
39681--39718
18
2.1
18
85
9
51
15
13
13
57
1.65
43912--43959
18
2.7
18
100
0
96
45
29
14
10
1.78
54762--54805
20
2.2
20
88
8
63
15
13
0
70
1.17
54769--54806
14
2.7
15
84
15
55
18
13
0
68
1.21
57088--57136
18
2.7
18
100
0
98
12
12
16
59
1.62
57737--57767
15
2.1
15
93
0
53
83
0
16
0
0.64
57735--57781
11
4.3
11
84
10
60
80
0
19
0
0.70
79053--79092
17
2.4
17
87
8
55
22
10
10
57
1.61
89332--89381
13
3.8
13
89
7
66
38
0
14
48
1.44
89333--89381
25
1.9
26
87
4
73
36
0
14
48
1.44
92947--92995
21
2.3
21
82
6
55
34
30
12
22
1.91
93308--93356
20
2.5
20
100
0
98
59
24
4
12
1.50
94711--94766
20
3.0
19
76
21
64
48
7
1
42
1.41
94775--94808
17
2.0
17
88
11
52
58
0
2
38
1.13
95985--96024
17
2.4
17
91
0
62
35
17
17
30
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
110147--110280
41
3.2
41
74
6
117
22
26
11
40
1.87
111228--111260
16
2.0
17
88
5
50
18
30
6
45
1.73
114048--114090
22
1.9
23
85
4
61
65
4
18
11
1.42
136888--137210
159
2.0
159
96
0
592
40
4
17
37
1.71
137781--137813
17
2.0
17
94
5
59
66
6
15
12
1.42
138023--138105
26
3.2
26
63
19
64
28
12
21
37
1.89
138000--138186
52
3.6
52
90
0
302
25
15
23
35
1.94
139366--139406
11
3.5
12
80
12
50
78
4
2
14
1.03
139536--139641
42
2.6
42
89
3
162
21
32
24
21
1.98
139630--139726
39
2.4
39
87
3
131
19
30
25
23
1.98
140102--140158
6
9.3
6
84
7
55
12
0
8
78
0.95
140074--140121
22
2.2
22
85
3
62
20
4
2
72
1.11
140102--140148
14
3.6
13
88
8
69
10
0
10
78
0.96
143164--143282
49
2.4
49
90
0
175
20
20
21
37
1.94
143414--143457
15
2.9
15
82
0
52
34
15
34
15
1.90

Tables:   1

The End!