Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014692.1 Kokia drynarioides strain JFW-HI SEQ_129731, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  97672

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9488--9577
46
2.0
46
100
0
180
34
12
20
33
1.89
17890--17962
31
2.4
30
77
8
76
42
10
6
39
1.67
46739--46786
22
2.2
22
85
3
62
8
12
2
77
1.08
46750--46795
22
2.1
22
91
0
74
10
10
0
78
0.97
47750--47781
6
5.5
6
92
7
57
84
0
0
15
0.63
47743--47802
17
3.8
16
84
8
86
78
0
1
20
0.84
47745--47800
21
2.6
21
78
21
62
80
0
1
17
0.80
47743--47800
27
2.1
27
90
6
91
79
0
1
18
0.82
47745--47800
6
10.6
5
78
21
53
80
0
1
17
0.80
50883--51122
51
4.6
51
85
3
302
31
15
24
28
1.95
59434--59487
28
1.9
28
88
0
81
51
9
16
22
1.72
59678--59809
44
3.0
43
83
3
165
35
21
9
32
1.87
61489--61541
15
3.5
15
81
0
52
33
16
9
39
1.81
62477--62548
29
2.4
30
82
15
96
50
8
1
40
1.41
63151--63204
23
2.3
23
83
0
63
29
29
22
18
1.97
70540--70569
13
2.3
13
94
0
51
90
6
3
0
0.56
74373--74403
12
2.6
12
94
0
53
32
32
16
19
1.94
76329--76384
28
2.0
28
92
0
94
39
3
46
10
1.56
76599--76631
5
6.8
5
86
6
50
81
0
3
15
0.80
79017--79055
14
2.7
15
80
8
53
25
7
10
56
1.59
79737--79768
14
2.4
13
90
10
55
25
3
0
71
1.00
83571--83608
14
2.7
14
80
15
51
76
2
13
7
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83570--83646
13
5.8
13
73
20
54
75
1
14
9
1.10
83584--83621
16
2.4
16
91
4
60
78
0
10
10
0.95
83630--83657
6
4.7
6
100
0
56
85
0
14
0
0.59
83583--83646
27
2.4
26
77
10
76
76
0
14
9
1.01
84681--84726
25
1.9
25
86
8
69
34
4
6
54
1.46
85106--85144
14
2.7
15
80
8
53
25
7
10
56
1.59
87839--87965
23
5.4
23
79
5
103
13
22
20
44
1.86
88485--88529
22
2.0
22
100
0
90
17
13
22
46
1.83
89280--89416
42
3.2
42
65
24
113
19
27
22
29
1.98
89228--89491
87
3.0
87
89
2
388
20
29
20
29
1.98
91641--91674
16
2.0
18
88
11
54
64
2
0
32
1.08
93540--93799
87
3.0
87
87
1
369
21
27
20
30
1.98

Tables:   1

The End!