Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014698.1 Kokia drynarioides strain JFW-HI SEQ_129737, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  100692

Tables:   1   

This is table  1  of  1  ( 46 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1814--1871
29
2.0
29
86
0
80
55
20
6
17
1.65
11794--11855
30
2.1
30
90
0
97
41
0
4
53
1.22
12621--12672
16
3.2
16
82
17
72
53
7
0
38
1.30
15038--15306
128
2.1
129
90
2
423
36
5
18
39
1.74
17562--17607
24
1.9
24
86
0
65
28
2
4
65
1.23
21155--21231
3
26.0
3
84
12
106
32
0
2
64
1.07
21499--21543
23
2.0
23
86
8
65
51
0
2
46
1.13
21499--21539
22
1.9
21
85
14
57
53
0
2
43
1.13
23913--23948
15
2.4
15
100
0
72
47
0
0
52
1.00
30848--30872
2
12.5
2
100
0
50
52
0
0
48
1.00
40582--40607
13
2.0
13
100
0
52
0
7
0
92
0.39
51426--51509
36
2.3
36
100
0
168
27
28
13
30
1.94
54866--54947
39
2.1
39
82
13
98
45
0
2
52
1.14
64518--64557
19
2.2
17
86
8
53
37
0
2
60
1.11
70083--70108
6
4.3
6
100
0
52
15
0
0
84
0.62
70083--70151
8
8.0
8
76
13
57
18
2
0
78
0.88
70083--70151
22
3.4
20
75
24
65
18
2
0
78
0.88
71698--71742
19
2.4
19
81
7
56
37
0
4
57
1.19
71742--71771
14
2.1
14
93
0
51
10
6
10
73
1.25
72544--72589
22
2.1
22
84
8
58
19
10
0
69
1.17
72558--72604
21
2.2
22
88
3
69
17
6
2
74
1.12
75818--76083
60
4.5
59
77
8
263
30
3
29
35
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75818--76144
59
5.5
59
76
11
253
30
3
29
35
1.75
75818--76144
29
11.0
29
68
14
152
30
3
29
35
1.75
77086--77134
13
3.8
13
75
25
50
22
10
22
44
1.82
77074--77124
24
2.3
24
87
12
74
23
7
23
45
1.79
78179--78242
32
2.0
32
96
0
119
48
1
3
46
1.27
80807--80848
20
2.0
21
90
9
68
38
0
0
61
0.96
80809--80858
20
2.4
20
83
6
55
40
0
2
58
1.10
86522--86579
23
2.5
23
82
2
62
50
3
3
43
1.36
87761--87800
21
1.9
21
90
10
64
50
5
2
42
1.37
87868--88176
157
2.0
158
89
1
478
37
15
11
35
1.84
93045--93100
29
1.9
29
85
0
76
50
5
3
41
1.43
94081--94139
31
1.9
31
92
0
100
23
20
10
45
1.81
94332--94489
59
2.6
59
79
2
163
47
15
15
21
1.82
96953--97029
40
2.0
40
84
2
102
46
9
20
23
1.79
97063--97156
26
3.4
26
78
16
107
29
1
10
58
1.39
97073--97133
32
1.9
32
96
0
113
27
1
9
60
1.38
97063--97165
32
3.4
32
72
15
110
28
1
10
59
1.42
97109--97166
26
2.2
26
84
0
71
29
3
8
58
1.44
97321--97410
38
2.4
38
85
7
112
61
12
3
23
1.46
97328--97410
32
2.6
32
92
0
130
61
10
3
24
1.45
97420--97474
27
2.0
27
92
0
92
20
23
30
25
1.98
100389--100474
4
21.2
4
79
11
77
65
0
34
0
0.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
100388--100474
20
4.5
19
87
9
115
64
0
35
0
0.94
100514--100558
19
2.4
18
82
10
54
33
0
2
64
1.06

Tables:   1

The End!