Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014703.1 Kokia drynarioides strain JFW-HI SEQ_129742, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42861

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
525--795
29
9.5
29
68
14
136
36
28
3
32
1.74
552--605
20
2.6
21
91
2
83
35
27
3
33
1.75
573--795
59
3.8
58
76
7
186
36
28
3
32
1.73
718--774
30
1.9
29
89
3
87
43
26
0
29
1.55
1174--1398
111
2.0
112
99
0
443
33
20
11
34
1.88
1880--1921
19
2.2
20
86
4
59
54
2
9
33
1.46
5113--5162
19
2.6
19
83
0
55
56
8
4
32
1.47
15520--15554
3
11.7
3
100
0
70
0
0
65
34
0.93
16794--16855
30
2.1
30
90
0
97
56
12
4
25
1.56
16884--16932
22
2.2
22
77
0
53
59
6
10
24
1.53
29982--30036
27
2.0
27
89
6
85
10
34
21
32
1.89
34092--34144
3
18.3
3
92
7
92
33
0
0
66
0.92
36325--36387
31
2.1
29
88
5
90
31
12
28
26
1.93
36324--36399
28
2.6
28
85
8
98
30
13
27
28
1.94
36442--36846
29
13.8
29
72
16
158
33
2
27
35
1.72
36500--36850
59
6.0
58
81
5
325
33
2
27
36
1.70
36501--36836
117
2.9
117
83
4
358
33
2
27
36
1.69
37597--37670
36
2.1
36
82
5
89
12
24
2
60
1.44
38418--38478
30
2.1
29
82
14
72
47
1
1
49
1.21
38474--38514
17
2.4
17
84
8
57
65
0
0
34
0.93
38658--38719
32
1.9
32
86
0
88
46
0
0
53
1.00
38672--38739
27
2.5
27
73
4
66
47
0
0
52
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39650--39700
16
2.9
18
81
18
56
47
3
0
49
1.20
41497--41537
16
2.6
16
88
3
57
58
0
0
41
0.98
41525--41610
39
2.2
38
85
6
111
53
5
2
38
1.38
41699--41767
20
3.5
20
69
16
63
55
1
0
43
1.08

Tables:   1

The End!