Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014710.1 Kokia drynarioides strain JFW-HI SEQ_129749, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67371

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
524--900
30
12.8
29
80
4
342
36
25
3
35
1.73
524--900
59
6.4
59
81
5
395
36
25
3
35
1.73
11647--11708
30
2.1
30
100
0
124
40
22
16
20
1.91
13145--13648
205
2.5
205
89
1
776
35
21
22
21
1.96
13633--13703
37
1.9
37
88
0
106
39
19
21
19
1.93
14068--14108
17
2.5
16
92
7
73
34
0
2
63
1.08
14109--14147
14
2.7
15
84
7
55
58
17
5
17
1.56
15706--16134
117
3.7
116
86
2
581
33
26
4
35
1.76
15706--16192
176
2.8
175
80
8
512
33
27
4
34
1.77
15706--16140
59
7.4
59
81
5
497
34
26
4
34
1.77
15706--16139
29
14.8
28
75
10
235
33
26
4
35
1.77
28178--28251
6
12.7
6
75
5
62
41
2
2
52
1.29
28159--28235
29
2.7
29
82
8
77
40
2
2
54
1.28
28195--28250
29
1.9
29
85
7
78
41
3
3
51
1.36
28178--28251
35
2.1
35
84
0
94
41
2
2
52
1.29
28956--29009
3
18.0
3
100
0
108
66
0
0
33
0.92
30181--30711
59
9.1
59
80
6
505
35
28
3
32
1.75
30181--30697
116
4.4
116
82
8
552
35
28
3
33
1.74
30154--30769
175
3.5
173
79
6
611
35
27
4
33
1.76
30154--30711
29
19.1
29
70
17
295
35
27
3
32
1.74
30181--30771
59
10.2
58
76
10
350
34
27
4
33
1.77
30181--30769
116
5.1
115
77
10
461
34
27
4
33
1.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30212--30779
29
19.5
28
70
18
217
33
27
4
33
1.78
30737--30807
29
2.5
29
81
6
83
32
23
9
33
1.88
35436--35501
31
2.1
31
100
0
132
40
24
28
6
1.79
42640--42713
6
12.8
6
76
8
64
41
2
2
52
1.29
42640--42683
17
2.6
17
88
0
61
40
0
4
54
1.21
43438--43466
3
9.7
3
100
0
58
68
31
0
0
0.89
43465--43519
3
18.7
3
78
10
60
65
1
0
32
1.03
44770--45226
29
15.5
30
68
16
136
32
28
5
33
1.80
44732--45303
59
9.8
59
83
5
612
32
28
5
32
1.81
44745--45303
117
4.8
118
81
7
588
33
28
5
33
1.80
45092--45334
29
8.3
30
71
11
103
33
26
6
32
1.83
47140--47182
17
2.5
17
88
3
59
48
2
27
20
1.62
52475--52512
17
2.2
17
95
0
67
57
0
23
18
1.40
54286--54333
25
1.9
25
91
0
78
39
6
6
47
1.54
64015--64048
17
2.0
17
94
0
59
26
17
11
44
1.83

Tables:   1

The End!