Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014726.1 Kokia drynarioides strain JFW-HI SEQ_129765, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  120591

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86--130
21
2.2
20
80
7
56
2
24
0
73
0.95
88--137
11
4.3
11
82
12
55
4
22
0
74
0.99
1415--1443
2
15.0
2
92
7
51
48
0
0
51
1.00
6149--6180
15
2.2
14
94
5
55
40
0
0
59
0.97
6149--6180
7
4.4
7
92
7
55
40
0
0
59
0.97
7824--7857
3
11.3
3
100
0
68
67
0
0
32
0.91
7872--7906
18
1.9
18
88
11
54
28
5
0
65
1.15
14214--14247
17
1.9
18
94
5
61
41
26
2
29
1.70
15157--15208
21
2.5
21
96
0
95
40
21
7
30
1.81
17334--17421
28
3.1
28
62
28
69
53
9
12
25
1.67
17334--17446
56
2.0
56
100
0
226
51
7
12
29
1.66
22834--22871
18
2.1
18
85
9
51
55
13
5
26
1.59
26437--26499
24
2.6
24
82
0
81
50
9
12
26
1.71
26721--26784
18
3.6
18
91
0
92
32
25
18
23
1.97
30289--30331
16
2.8
15
79
6
50
58
2
16
23
1.50
43016--43049
18
1.9
18
88
5
52
64
8
2
23
1.36
43522--43570
24
2.0
24
84
0
62
42
6
2
48
1.39
43701--43739
20
2.0
20
95
5
71
43
0
10
46
1.37
43696--43740
19
2.4
18
85
10
63
40
0
8
51
1.33
45005--45043
6
6.5
6
87
0
51
23
30
0
46
1.53
55425--55460
18
2.0
18
89
10
56
8
13
5
72
1.27
71075--71110
18
1.9
19
88
5
56
16
19
0
63
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73113--73148
18
2.0
18
88
0
54
38
13
2
44
1.59
76523--76593
31
2.4
30
81
6
81
35
8
11
45
1.70
79755--80108
175
2.0
175
87
6
513
25
13
22
38
1.91
78757--80600
669
2.8
672
90
3
3038
27
14
21
36
1.93
81049--81239
97
1.9
98
81
5
224
24
17
25
32
1.97
100781--100886
22
4.7
22
76
13
99
11
22
24
41
1.86
100783--100854
22
3.2
22
90
2
108
11
20
25
43
1.85
100860--100914
25
2.3
24
84
6
67
12
29
21
36
1.91
100783--100919
23
6.0
23
76
10
120
10
24
23
41
1.86
100872--100946
25
3.0
25
82
7
89
16
28
18
37
1.92
102566--102644
8
10.9
8
79
20
70
34
1
0
64
1.02
102567--102644
14
5.4
15
72
17
67
34
1
0
64
1.02
104969--105001
15
2.4
14
85
14
50
87
0
12
0
0.53
110505--110753
124
2.0
124
100
0
498
46
8
18
27
1.77
116588--116614
2
13.5
2
100
0
54
48
0
0
51
1.00

Tables:   1

The End!