Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014735.1 Kokia drynarioides strain JFW-HI SEQ_129774, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81842

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10228--10409
96
1.9
96
82
6
226
36
13
20
29
1.91
10621--11025
58
6.9
59
85
5
502
30
4
33
32
1.78
10621--11025
117
3.5
118
86
4
536
30
4
33
32
1.78
10665--10996
29
11.4
28
74
16
239
29
3
33
33
1.76
12160--12197
19
2.0
19
85
10
51
60
5
13
21
1.52
12585--12667
28
3.0
28
92
0
139
12
22
20
44
1.84
18984--19126
71
2.0
71
98
0
277
23
18
16
41
1.90
20512--20548
18
2.1
18
89
0
56
24
27
0
48
1.51
27672--27714
16
2.8
15
79
6
50
53
0
4
41
1.21
30912--30961
24
2.1
24
100
0
100
30
4
16
50
1.63
41168--41204
19
2.0
18
89
5
56
64
0
5
29
1.15
42963--43173
30
7.1
30
73
12
116
36
1
20
40
1.64
42940--43116
60
3.0
59
78
7
187
33
2
22
41
1.68
42956--43184
119
1.9
120
78
7
252
36
2
20
39
1.67
44106--44164
16
3.8
16
77
20
54
23
0
3
72
0.99
44106--44164
10
6.1
10
73
15
52
23
0
3
72
0.99
54709--54747
17
2.2
19
90
9
64
7
33
0
58
1.26
54774--54804
8
3.9
8
91
0
53
35
0
22
41
1.54
56100--56149
15
3.3
15
80
0
55
30
6
0
64
1.18
58293--58347
21
2.7
20
86
8
67
32
0
3
63
1.12
63730--63858
69
1.9
69
83
6
172
28
27
11
32
1.92
64930--64971
20
2.0
20
86
4
57
59
0
0
40
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66173--66315
71
2.0
71
100
0
286
33
24
11
30
1.90
73805--73836
16
1.9
17
93
6
57
9
31
0
59
1.29
74038--74073
2
18.0
2
100
0
72
50
0
0
50
1.00
78014--78062
24
2.0
25
84
11
66
24
0
20
55
1.44
81127--81415
30
9.8
30
82
7
351
32
5
28
33
1.79
81127--81416
59
4.9
60
84
5
353
32
5
28
33
1.79
81131--81415
29
9.7
29
80
7
299
32
4
28
33
1.79

Tables:   1

The End!