Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014740.1 Kokia drynarioides strain JFW-HI SEQ_129779, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85270

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
560--748
23
8.5
23
76
12
171
43
21
23
11
1.84
628--748
48
2.6
46
84
7
163
41
23
24
10
1.86
6186--6374
23
8.5
23
76
12
171
43
21
23
11
1.84
6254--6374
48
2.6
46
84
7
163
41
23
24
10
1.86
10544--12841
618
3.8
612
87
3
3077
41
9
20
28
1.83
14197--14267
31
2.3
31
82
0
88
36
14
9
39
1.79
21381--21428
22
2.1
23
84
7
62
33
6
4
56
1.44
21983--22170
36
5.2
36
61
19
95
24
13
7
54
1.65
22034--22144
33
3.2
33
65
30
86
22
12
9
55
1.64
21961--22181
72
3.1
72
96
0
397
25
13
6
54
1.63
27630--27744
60
1.9
58
85
3
158
38
14
16
30
1.89
33533--33658
43
3.1
43
59
23
101
46
17
5
30
1.71
33531--33684
77
2.0
77
100
0
308
46
15
6
31
1.71
40335--40469
60
2.2
60
86
0
189
42
6
1
48
1.38
40345--40459
32
3.8
31
72
15
105
43
6
0
49
1.33
40344--40481
32
4.7
28
72
17
95
43
5
0
50
1.31
42110--42227
59
2.0
59
100
0
236
44
16
10
28
1.81
50979--51048
34
2.1
33
81
7
79
51
28
15
4
1.62
51155--51570
208
2.0
209
85
6
567
43
3
6
46
1.47
61299--61360
33
2.0
30
84
15
81
38
20
0
40
1.53
66262--66292
2
15.5
2
93
0
53
45
0
3
51
1.17
68064--68145
33
2.5
33
87
0
110
20
26
19
32
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74557--74600
22
2.0
22
86
4
63
34
2
0
63
1.07
74559--74604
15
3.1
15
81
3
58
34
0
0
65
0.93

Tables:   1

The End!