Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014775.1 Kokia drynarioides strain JFW-HI SEQ_129816, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  205922

Tables:   1   

This is table  1  of  1  ( 51 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
980--1004
2
12.5
2
100
0
50
48
0
0
52
1.00
2648--2679
7
4.6
7
100
0
64
12
0
12
75
1.06
2648--2691
14
3.2
14
90
3
54
11
0
11
77
1.00
2648--2691
21
2.2
20
87
4
61
11
0
11
77
1.00
5315--5361
17
2.8
17
96
0
85
36
38
10
14
1.81
5356--5521
17
9.9
17
77
5
167
43
24
9
22
1.82
9861--9928
32
2.2
31
81
2
73
25
4
22
48
1.69
10870--10971
30
3.4
29
83
6
134
50
0
0
49
1.00
10875--10968
28
3.3
28
73
19
95
52
0
0
47
1.00
11515--11564
24
2.0
25
85
11
68
46
4
4
46
1.40
11205--11697
248
2.0
256
81
6
594
44
7
7
40
1.60
22088--22137
20
2.5
20
80
6
57
38
6
14
42
1.70
22296--22329
4
8.5
4
93
0
59
73
0
2
23
0.97
28339--28408
20
3.4
20
78
4
68
35
7
8
48
1.61
29598--29638
20
2.0
20
86
9
57
31
21
14
31
1.94
30444--30492
22
2.2
22
100
0
98
42
4
24
28
1.73
30466--30830
169
2.2
169
98
0
712
35
14
21
28
1.93
30804--30852
22
2.2
22
96
0
89
44
4
22
28
1.71
37645--37686
16
2.5
17
77
14
52
71
2
2
23
1.10
42459--42489
8
3.8
8
95
4
53
22
22
12
41
1.88
50603--50761
50
3.2
50
75
5
151
38
19
20
21
1.94
50784--50979
79
2.5
79
80
9
245
34
23
16
25
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50784--51034
39
6.4
40
77
9
241
33
25
15
24
1.95
51589--51615
4
6.8
4
100
0
54
74
0
0
25
0.83
51588--51630
16
2.7
16
82
17
54
69
0
2
27
1.00
55216--55292
27
2.9
27
92
0
127
20
24
14
40
1.90
56583--56820
23
10.3
23
78
3
255
33
4
13
48
1.62
84115--84191
29
2.5
31
81
6
77
32
2
16
48
1.61
86454--86582
55
2.3
57
82
5
147
26
29
18
25
1.98
87669--87898
52
4.5
52
86
3
306
35
24
13
26
1.92
98262--98310
14
3.6
14
78
10
66
71
2
4
22
1.13
98257--98309
26
2.0
26
100
0
106
73
3
3
18
1.14
102504--102534
13
2.3
14
94
5
55
0
48
0
51
1.00
103857--104035
41
4.4
41
85
2
225
25
23
8
42
1.82
104826--104873
22
2.2
21
81
3
60
39
12
0
47
1.41
110336--110642
23
13.3
23
87
0
407
35
4
13
47
1.63
116942--116981
3
13.3
3
94
0
53
42
0
0
57
0.98
117853--117880
2
14.0
2
100
0
56
0
50
0
50
1.00
117900--117940
18
2.3
18
82
0
55
24
7
7
60
1.48
117851--118012
86
1.9
85
84
3
218
12
21
4
61
1.49
119020--119092
30
2.4
31
79
6
87
49
17
12
20
1.79
121689--121763
12
6.2
11
73
13
51
33
1
20
45
1.59
121689--121802
13
9.1
12
69
15
70
34
2
20
42
1.66
121686--121800
50
2.3
51
95
3
214
34
3
20
41
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
121693--121774
25
3.3
25
74
19
98
36
1
23
39
1.63
131485--131520
18
2.0
18
94
0
63
16
30
13
38
1.88
149731--149764
14
2.4
14
90
5
50
26
2
2
67
1.19
152516--152568
16
3.2
16
73
21
56
62
0
18
18
1.33
155753--155787
7
5.0
7
96
0
61
45
40
0
14
1.45
187411--187489
36
2.1
38
83
4
99
35
34
13
16
1.88
205882--205922
2
20.5
2
94
0
73
51
0
0
48
1.00

Tables:   1

The End!