Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014783.1 Kokia drynarioides strain JFW-HI SEQ_129825, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  107143

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3251--3293
19
2.3
19
92
4
70
69
9
0
20
1.15
16712--16829
17
6.5
17
66
24
55
41
2
1
54
1.24
16715--16847
58
2.3
59
82
10
148
43
2
3
51
1.29
21422--21478
30
1.9
30
92
7
98
45
7
19
28
1.76
32911--32940
2
15.0
2
100
0
60
50
0
0
50
1.00
38703--38746
23
1.9
23
85
0
61
59
4
9
27
1.48
41198--41254
21
2.7
22
83
8
73
45
1
1
50
1.22
45993--46023
7
4.4
7
100
0
62
12
0
0
87
0.55
46120--46767
126
5.1
124
85
5
789
26
17
16
39
1.91
46120--46765
255
2.6
252
85
3
859
26
17
16
39
1.91
49866--49919
18
2.8
20
75
13
58
51
1
5
40
1.36
51127--51202
29
2.5
29
80
6
80
52
9
3
34
1.52
64186--64258
28
2.6
28
82
6
87
43
0
5
50
1.25
65163--65196
17
1.9
17
88
5
50
0
17
0
82
0.67
65712--65755
14
2.8
16
80
16
56
52
0
0
47
1.00
68825--68938
47
2.5
47
83
8
130
43
25
4
26
1.73
70899--72235
228
5.9
227
86
1
1404
29
23
25
22
1.99
70899--72235
456
2.9
456
83
1
1550
29
23
25
22
1.99
70899--72259
684
2.0
684
81
1
1591
28
23
25
22
1.99
75324--75354
7
4.4
7
100
0
62
16
29
29
25
1.96
81030--81088
31
1.9
30
89
3
91
45
1
10
42
1.48
91264--91328
32
2.0
32
100
0
130
38
9
15
36
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
95066--95106
17
2.4
17
88
8
57
73
0
0
26
0.84
98970--99011
20
2.0
22
86
9
61
19
14
2
64
1.39
98970--99018
20
2.4
21
83
12
59
18
12
2
67
1.32
106854--106921
34
2.1
33
84
13
88
10
4
16
69
1.33

Tables:   1

The End!