Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014785.1 Kokia drynarioides strain JFW-HI SEQ_129827, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  176203

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
501--1335
180
4.5
180
84
7
1083
30
15
21
32
1.94
479--1335
189
4.6
187
83
7
1140
30
15
21
32
1.94
479--1335
369
2.3
366
88
2
1297
30
15
21
32
1.94
1387--1491
3
34.3
3
79
14
90
67
2
2
26
1.18
1417--1491
34
2.2
33
79
11
80
68
4
1
26
1.16
1429--1486
22
2.6
21
84
13
62
68
1
1
27
1.08
1501--1770
105
2.6
106
93
1
454
33
23
14
28
1.94
3913--4774
181
4.7
189
86
6
1224
30
15
21
32
1.94
4790--4909
3
39.3
3
75
15
86
68
2
3
25
1.18
4779--4907
34
3.8
34
81
5
145
68
2
4
24
1.21
5953--7291
291
4.6
291
86
3
1826
28
21
15
33
1.94
8429--9167
189
3.9
189
89
0
1057
29
16
21
32
1.95
9224--9568
189
1.8
189
90
0
555
29
15
22
32
1.95
9597--9626
8
3.8
8
100
0
60
86
0
0
13
0.57
9626--9806
3
59.0
3
76
10
125
64
2
6
26
1.30
9595--9635
16
2.6
15
84
7
55
80
0
0
19
0.71
9679--9790
41
2.8
39
81
14
129
67
2
4
25
1.22
10491--11063
291
2.0
285
83
4
722
28
21
15
33
1.94
11266--11299
2
17.0
2
100
0
68
50
0
0
50
1.00
14295--14321
3
9.0
3
100
0
54
0
33
0
66
0.92
16072--16106
5
7.0
5
100
0
70
20
60
20
0
1.37
28159--28234
30
2.7
29
80
11
77
59
1
2
36
1.20
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37651--37885
118
2.0
117
94
1
418
36
14
28
21
1.92
39164--39217
25
2.2
24
80
6
63
46
1
0
51
1.11
42153--42301
74
2.0
74
100
0
298
28
16
14
40
1.88
52009--52040
3
10.7
3
93
0
55
0
37
0
62
0.95
52250--52280
5
6.2
5
96
0
53
19
16
22
41
1.89
52608--52656
2
24.5
2
100
0
98
48
0
0
51
1.00
59350--59380
16
1.9
16
93
0
53
45
9
6
38
1.63
86778--86830
25
2.1
26
82
10
74
66
5
3
24
1.31
87106--87154
22
2.3
21
85
3
62
53
2
4
40
1.32
100675--100711
7
5.3
7
90
9
58
16
0
0
83
0.64
100676--100709
17
2.1
15
89
10
50
11
0
0
88
0.52
103114--103163
18
2.5
20
75
12
50
36
0
2
62
1.07
115182--115215
13
2.5
13
90
4
50
58
0
0
41
0.98
115220--115265
16
2.8
17
87
9
69
67
0
0
32
0.91
123930--124031
41
2.5
41
93
1
179
31
10
14
43
1.80
134044--134081
14
2.6
15
83
4
51
78
0
18
2
0.86
141858--141886
2
14.5
2
100
0
58
51
0
0
48
1.00
146144--146184
21
2.0
21
85
9
57
39
0
12
48
1.41
146403--146463
25
2.4
25
81
8
70
13
31
21
34
1.91
146426--146473
25
1.9
25
86
0
69
10
31
18
39
1.85
148504--148537
17
2.0
17
88
0
50
17
29
20
32
1.96
151501--151525
13
1.9
13
100
0
50
16
12
40
32
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
159191--159218
5
5.6
5
100
0
56
0
0
35
64
0.94
163204--163245
21
2.0
21
90
4
68
64
2
0
33
1.07
175000--175056
29
2.0
29
82
6
71
52
10
3
33
1.53

Tables:   1

The End!