Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014786.1 Kokia drynarioides strain JFW-HI SEQ_129828, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  101137

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
759--805
24
2.0
24
100
0
94
25
14
8
51
1.71
13490--13524
5
7.2
5
90
3
54
0
14
0
85
0.59
21844--21874
2
15.5
2
93
0
53
0
0
48
51
1.00
21988--22038
11
4.4
11
83
11
57
72
0
25
1
0.95
21999--22064
4
16.8
4
76
20
59
71
0
27
1
0.95
21995--22064
26
2.8
24
85
12
72
70
0
28
1
0.96
22349--22407
18
3.4
17
79
6
64
45
0
1
52
1.10
22372--22432
6
10.5
6
72
13
56
45
1
1
50
1.21
22375--22430
11
4.9
11
78
10
51
41
1
1
55
1.21
22349--22451
35
3.0
34
81
8
102
46
1
1
49
1.24
22349--22451
17
5.9
17
81
4
98
46
1
1
49
1.24
24300--24449
59
2.5
59
87
1
237
36
33
3
27
1.73
24300--24446
30
5.0
30
87
2
226
35
33
3
27
1.74
24300--24476
89
2.0
88
90
5
259
35
33
3
27
1.76
43457--43487
12
2.6
12
94
0
53
19
6
0
74
1.03
44242--44276
17
2.0
18
88
5
54
17
22
0
60
1.37
46042--46125
43
2.0
41
93
4
141
41
9
3
45
1.54
54180--54237
27
2.2
26
87
3
80
29
13
10
46
1.77
63292--63349
27
2.2
26
84
3
71
29
15
8
46
1.75
66115--66148
17
1.9
17
88
5
50
29
14
5
50
1.67
76948--77022
37
2.0
37
100
0
150
24
22
13
40
1.90
79975--80001
10
2.7
10
100
0
54
18
25
11
44
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86412--86445
18
1.9
18
88
5
52
29
0
5
64
1.17
89292--89348
30
1.9
29
92
3
96
35
1
26
36
1.67
99518--99552
4
8.8
4
100
0
70
51
22
0
25
1.48
100176--100234
28
2.0
31
84
15
81
61
5
1
32
1.28
101098--101137
2
20.0
2
100
0
80
50
0
0
50
1.00

Tables:   1

The End!