Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014788.1 Kokia drynarioides strain JFW-HI SEQ_129830, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48787

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
239--318
7
11.7
7
81
2
65
51
33
0
15
1.43
239--318
14
5.9
14
76
5
83
51
33
0
15
1.43
232--318
21
4.2
21
79
8
81
51
32
0
16
1.44
239--302
33
1.9
34
90
3
103
53
32
0
14
1.41
1200--1258
23
2.6
23
78
5
66
8
28
16
45
1.77
2247--2313
20
3.3
20
83
8
91
29
14
10
44
1.79
2539--2622
35
2.4
35
79
16
93
38
39
1
21
1.61
2575--2626
14
3.7
14
84
0
68
38
38
0
23
1.55
2560--2618
28
2.1
27
87
3
82
32
42
0
25
1.55
5974--6015
17
2.5
17
88
0
57
35
9
7
47
1.64
6589--6647
28
2.1
28
100
0
118
40
11
6
40
1.68
14253--14889
211
3.0
211
92
1
1053
30
18
16
34
1.93
19301--19471
94
1.8
94
93
0
297
36
9
7
46
1.66
22837--22874
12
3.3
12
78
14
53
23
23
2
50
1.62
22822--22881
22
2.9
22
80
9
74
30
21
3
45
1.68
24149--24189
19
2.2
19
90
0
64
41
4
4
48
1.46
24492--25119
211
3.0
210
89
1
988
34
14
18
32
1.91
32820--32876
27
2.1
27
87
6
80
50
1
1
45
1.22
35289--35651
183
2.0
184
95
0
656
42
12
10
33
1.78
44635--44694
29
2.1
29
87
6
86
48
0
1
50
1.11
44656--44694
9
4.1
9
87
12
60
51
0
0
48
1.00
44656--44696
20
2.0
20
100
0
82
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45770--45839
29
2.4
29
83
11
90
52
0
0
47
1.00
45799--45841
20
2.0
22
91
8
72
53
0
0
46
1.00
45771--45839
9
8.2
9
71
26
53
52
0
0
47
1.00
45736--45848
49
2.3
51
87
6
160
50
1
0
47
1.11
45771--45847
20
4.0
20
73
21
65
50
1
0
48
1.09
47842--47896
23
2.4
24
84
9
78
29
23
0
47
1.52

Tables:   1

The End!