Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014794.1 Kokia drynarioides strain JFW-HI SEQ_129836, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  232543

Tables:   1   

This is table  1  of  1  ( 54 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3187--3213
7
3.9
7
100
0
54
29
0
0
70
0.88
6317--6359
22
2.0
22
90
0
68
37
6
9
46
1.63
15679--15712
17
1.9
18
94
5
61
20
11
20
47
1.81
37819--37869
24
2.1
24
88
0
75
21
9
11
56
1.63
38178--38202
8
3.1
8
100
0
50
24
24
0
52
1.48
46092--46155
30
2.1
31
85
8
87
48
0
3
48
1.17
79396--79433
20
2.0
20
85
10
53
47
0
0
52
1.00
94543--94590
23
2.1
23
81
11
55
33
2
0
64
1.05
97582--97631
18
2.8
18
85
14
61
2
14
0
84
0.72
97595--97629
13
2.7
13
86
0
52
0
11
0
88
0.51
97593--97638
23
2.0
23
83
8
58
2
10
2
84
0.79
103437--103482
23
2.0
23
86
4
65
19
4
13
63
1.46
109250--109292
23
1.9
22
90
4
68
34
0
0
65
0.93
109861--109897
14
2.6
14
100
0
74
13
32
5
48
1.65
120513--120572
21
3.0
20
88
9
86
65
1
1
31
1.13
121313--121343
12
2.7
11
90
9
53
80
0
19
0
0.71
121327--121373
24
2.0
24
95
0
85
65
0
27
6
1.16
121399--121492
35
2.7
35
73
20
83
24
0
15
59
1.36
122919--123040
30
4.1
30
83
7
106
50
9
6
34
1.60
122935--122986
14
3.6
14
71
19
52
48
5
3
42
1.45
122949--122999
16
3.3
16
69
20
54
54
5
1
37
1.36
122935--123019
30
2.9
30
92
1
127
50
8
4
36
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
125741--125818
38
2.1
38
100
0
156
37
23
20
19
1.95
125754--125814
19
3.2
19
66
25
56
36
22
22
18
1.95
128752--128811
32
1.9
30
83
12
77
20
16
13
50
1.78
134384--134427
11
4.0
11
85
8
54
65
2
0
31
1.05
135872--135915
17
2.8
15
80
12
52
43
0
0
56
0.99
136986--137287
150
2.0
150
96
0
559
42
11
15
30
1.82
137844--137885
22
1.9
22
90
0
66
40
2
0
57
1.12
141351--141394
18
2.3
20
84
7
56
31
2
0
65
1.05
143852--143952
3
34.0
3
92
2
168
65
0
31
2
1.08
145216--145248
17
1.9
17
88
11
50
27
0
6
66
1.15
145417--145561
50
2.9
49
77
9
127
37
13
11
37
1.82
145754--145793
21
1.9
21
90
10
64
27
5
15
52
1.63
165477--165505
15
1.9
15
100
0
58
41
0
0
58
0.98
166472--166631
79
2.0
79
100
0
320
28
17
7
46
1.75
166818--166846
8
3.8
8
95
4
51
58
0
0
41
0.98
167718--167777
29
2.1
29
96
0
111
50
21
13
15
1.78
172241--172344
42
2.5
42
76
9
122
22
1
30
45
1.63
172261--172337
21
3.6
21
70
8
57
20
2
32
44
1.66
178347--178371
13
1.9
13
100
0
50
40
0
12
48
1.40
178884--179204
160
2.0
160
97
0
606
44
11
9
33
1.75
195842--195879
19
2.1
18
90
5
58
57
7
0
34
1.28
196049--196079
16
1.9
16
93
0
53
35
6
9
48
1.62
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
198252--198281
16
1.9
16
93
6
53
16
13
0
70
1.18
198247--198304
22
2.7
22
86
7
75
15
12
3
68
1.32
198263--198304
21
2.0
22
90
4
68
16
9
4
69
1.33
202764--202793
16
1.9
16
93
6
53
16
13
0
70
1.18
202759--202816
22
2.7
22
86
7
75
15
12
3
68
1.32
202775--202816
21
2.0
22
90
4
68
16
9
4
69
1.33
203578--203608
16
1.9
16
93
0
53
54
0
0
45
0.99
207225--207289
30
2.1
30
88
8
96
55
7
1
35
1.38
215271--215328
27
2.1
27
87
6
82
50
3
6
39
1.46
224331--224424
49
1.9
49
95
0
170
40
15
9
34
1.80

Tables:   1

The End!