Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014800.1 Kokia drynarioides strain JFW-HI SEQ_129842, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  166362

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7892--7930
20
1.9
21
84
5
53
53
17
10
17
1.71
16801--16983
84
2.2
84
80
7
203
26
20
21
32
1.97
16858--17023
42
4.0
42
70
7
131
27
21
20
31
1.98
17818--17902
26
3.2
26
75
14
84
43
0
1
55
1.07
25533--25577
22
2.1
21
84
12
56
66
0
4
28
1.11
26179--26253
31
2.4
31
88
0
114
33
13
10
42
1.78
27850--27879
15
2.0
15
100
0
60
33
33
0
33
1.58
35366--35390
12
2.1
12
100
0
50
40
0
8
52
1.31
35956--36012
27
2.1
27
100
0
114
33
14
14
38
1.85
46118--46167
24
2.0
25
88
7
75
26
16
6
52
1.66
54364--54409
23
2.0
23
95
0
83
23
0
23
52
1.48
55650--55692
23
1.9
23
85
4
61
25
2
2
69
1.12
63507--63588
31
2.7
30
79
7
87
42
2
1
53
1.21
70950--70985
13
2.6
15
79
20
51
69
0
0
30
0.89
71838--71881
2
22.5
2
88
4
63
50
0
2
47
1.13
75079--75137
27
2.2
27
90
0
91
32
10
20
37
1.86
92823--92863
22
1.9
22
85
5
57
43
0
2
53
1.13
93410--93449
21
1.9
21
84
0
53
27
12
5
55
1.58
94107--94871
287
2.7
287
91
2
1187
42
20
11
26
1.86
94756--94989
118
2.0
118
95
0
423
42
14
15
27
1.86
94469--95266
405
2.0
400
92
1
1335
42
18
12
26
1.86
94874--95666
282
2.8
283
88
2
1142
43
19
11
25
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
98357--98448
44
2.1
44
97
2
177
45
7
8
38
1.64
98368--98440
21
3.2
24
64
28
68
46
6
8
38
1.60
119153--119178
13
2.0
13
100
0
52
76
0
0
23
0.78
119792--119847
28
2.0
28
86
6
78
67
7
3
21
1.30
129762--129821
24
2.5
24
72
2
59
53
8
10
28
1.63
137603--137644
21
2.0
21
95
0
75
33
2
0
64
1.07
141382--141428
24
1.9
25
87
12
71
70
4
25
0
1.05
141490--141553
29
2.2
29
85
0
83
32
15
3
48
1.61
143933--143967
18
1.9
18
94
0
61
42
0
0
57
0.99
148248--148295
3
16.0
3
100
0
96
33
0
0
66
0.92
153665--153691
8
3.4
8
100
0
54
0
37
0
62
0.95
157951--157992
22
2.0
21
85
4
57
61
21
7
9
1.50
159530--159574
19
2.4
19
81
7
56
37
0
4
57
1.19
161924--161973
21
2.4
21
86
0
64
50
14
10
26
1.73
165878--165908
6
5.0
6
96
4
53
16
0
0
83
0.64

Tables:   1

The End!