Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014817.1 Kokia drynarioides strain JFW-HI SEQ_129859, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  179261

Tables:   1   

This is table  1  of  1  ( 52 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1357--1381
3
8.3
3
100
0
50
68
0
32
0
0.90
1438--1504
31
2.2
31
86
5
91
29
22
20
26
1.99
3925--3958
16
2.1
17
88
5
52
55
0
0
44
0.99
6768--6796
13
2.1
14
93
6
51
68
0
10
20
1.18
7519--7555
14
2.6
15
83
12
51
67
0
0
32
0.91
13991--14050
16
3.9
15
76
10
59
66
3
0
30
1.07
13991--14050
31
1.9
31
83
6
77
66
3
0
30
1.07
20233--20276
20
2.2
20
84
12
54
52
0
15
31
1.44
21060--21290
42
5.4
43
80
9
224
36
9
25
28
1.87
30162--30205
16
2.7
16
80
16
54
52
0
2
45
1.13
30235--30315
35
2.4
34
89
2
126
4
14
8
71
1.27
30573--30617
13
3.4
13
77
17
56
80
6
6
6
1.04
30573--30620
14
3.5
14
78
16
64
79
6
8
6
1.07
34646--34708
31
2.0
31
93
0
108
47
7
7
36
1.62
35025--35064
17
2.4
17
87
8
55
52
12
20
15
1.74
37460--37525
25
2.7
25
90
2
98
25
1
9
63
1.33
37469--37525
12
4.7
12
81
18
73
24
0
8
66
1.20
37467--37525
25
2.4
25
97
2
111
25
0
8
66
1.20
41502--41569
21
3.2
21
76
12
66
72
7
10
10
1.29
42420--42450
2
15.5
2
100
0
62
51
0
0
48
1.00
43741--43848
30
3.6
30
83
6
139
35
0
25
37
1.63
43732--43859
30
4.3
29
79
6
123
36
2
25
35
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43741--43859
59
2.0
59
83
3
150
35
0
26
37
1.62
43862--43936
30
2.5
30
84
4
89
36
2
20
41
1.66
45016--45075
29
2.0
30
87
9
88
60
1
1
36
1.17
45008--45093
40
2.2
39
82
10
97
62
1
1
34
1.10
50336--50394
27
2.3
26
79
5
66
33
0
8
57
1.29
73555--73949
132
3.0
132
90
0
594
29
20
22
27
1.98
79559--79584
9
2.9
9
100
0
52
57
23
11
7
1.59
80606--80690
4
21.0
4
76
11
66
67
0
32
0
0.91
80636--80684
20
2.5
20
96
0
89
61
0
38
0
0.96
92680--92715
18
1.9
19
88
5
56
30
2
36
30
1.72
112521--112563
17
2.5
17
81
7
52
32
0
2
65
1.06
113255--113329
16
4.4
16
85
11
105
48
0
5
46
1.25
113255--113328
35
2.2
33
90
4
112
48
0
5
45
1.25
121569--121625
28
2.0
28
83
12
73
57
0
3
38
1.16
122314--122356
22
2.0
22
85
0
59
60
6
9
23
1.51
123754--123807
3
18.3
3
88
3
83
66
0
1
31
1.02
126223--126256
14
2.4
14
90
0
50
67
5
2
23
1.26
128193--128226
17
2.0
17
94
0
59
44
0
2
52
1.16
131157--131197
6
6.8
6
83
10
57
17
2
14
65
1.37
131263--131312
26
1.9
26
91
0
82
60
10
0
30
1.30
131271--131327
26
2.2
26
83
0
69
59
7
1
31
1.34
140408--140441
16
2.1
16
100
0
68
47
11
5
35
1.65
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
156855--156889
3
11.7
3
93
0
61
34
62
0
2
1.10
157200--157233
6
5.7
6
92
0
50
8
2
35
52
1.47
160937--160962
3
8.7
3
100
0
52
69
0
0
30
0.89
165953--166002
21
2.4
22
80
12
52
52
0
0
48
1.00
165969--166019
21
2.4
21
86
0
66
50
1
1
45
1.24
169695--169766
35
2.1
35
97
0
135
37
19
15
27
1.92
170536--170628
29
3.1
29
77
9
89
27
8
5
58
1.50
170559--170641
29
2.8
30
81
3
96
31
10
3
54
1.52

Tables:   1

The End!