Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014819.1 Kokia drynarioides strain JFW-HI SEQ_129861, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  131914

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39--80
13
2.9
14
80
13
50
54
0
0
45
0.99
43--79
16
2.3
16
86
13
58
59
0
0
40
0.97
621--651
15
2.1
15
93
0
53
58
0
32
9
1.31
1013--1071
29
2.0
30
90
3
93
32
8
10
49
1.67
13923--14012
14
6.9
14
67
25
63
36
1
17
44
1.57
17631--17735
52
2.0
52
86
0
147
34
30
13
21
1.92
20522--20595
7
10.6
7
97
0
112
24
0
63
12
1.28
22944--23327
30
12.9
28
72
15
134
39
2
25
32
1.69
22939--23334
59
6.6
59
78
9
304
38
2
26
32
1.70
23149--23344
60
3.3
59
81
8
191
37
1
24
36
1.63
23187--23343
30
5.2
29
78
10
156
36
0
24
38
1.60
29275--29316
3
14.0
3
82
9
50
33
7
0
59
1.25
33186--33306
47
2.7
44
87
8
179
34
3
9
52
1.49
37363--37387
6
4.2
6
100
0
50
16
32
0
52
1.44
62985--63026
21
2.0
21
85
0
57
33
11
47
7
1.68
62991--63031
21
2.0
21
90
0
64
29
12
53
4
1.58
64092--64122
14
2.2
14
94
0
53
41
0
9
48
1.36
64494--64545
19
2.6
20
81
6
52
46
0
1
51
1.12
88810--88843
14
2.4
14
90
0
50
70
2
0
26
1.01
88814--88849
11
3.3
11
88
0
54
69
5
0
25
1.10
88814--88862
22
2.2
22
77
0
53
67
8
2
22
1.28
89836--89881
20
2.4
18
80
16
56
69
15
6
8
1.34
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91598--91633
17
2.2
17
90
5
56
58
0
8
33
1.28
92839--92881
15
2.9
14
81
18
52
62
4
2
30
1.28
97894--97953
30
2.0
31
87
9
88
40
3
16
40
1.65
104443--104467
2
12.5
2
100
0
50
0
0
48
52
1.00
105671--105701
2
15.5
2
100
0
62
51
0
0
48
1.00
114840--114902
29
2.2
29
86
8
85
46
0
3
50
1.17
126569--126601
2
16.5
2
100
0
66
48
0
0
51
1.00

Tables:   1

The End!