Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014827.1 Kokia drynarioides strain JFW-HI SEQ_129869, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60655

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5284--5315
13
2.5
13
100
0
64
0
12
0
87
0.54
5284--5325
12
3.4
12
81
15
50
2
14
0
83
0.75
9917--9944
12
2.3
12
100
0
56
60
0
14
25
1.34
10068--10146
39
2.1
38
81
11
90
58
1
3
36
1.24
18198--18224
6
4.5
6
100
0
54
37
0
62
0
0.95
18764--18821
30
1.9
30
82
6
73
20
0
8
70
1.13
19081--19124
23
2.0
22
86
4
61
65
0
0
34
0.93
29629--29669
19
2.2
19
95
0
73
43
4
7
43
1.53
29762--29805
22
2.0
22
95
0
79
29
22
4
43
1.73
35666--35761
48
2.0
48
100
0
192
43
10
18
27
1.82
37924--37953
15
2.0
15
93
0
51
63
10
6
20
1.47
43942--43990
17
2.9
17
93
0
80
24
14
2
59
1.46
46176--46218
18
2.4
17
82
17
52
51
0
2
46
1.13
56218--56302
42
2.0
42
90
4
136
47
17
0
35
1.48
58045--58858
213
3.8
212
85
4
1048
28
16
21
34
1.95
58045--58858
426
1.9
425
86
2
1161
28
16
21
34
1.95
60168--60655
213
2.3
213
97
0
913
29
16
21
32
1.95

Tables:   1

The End!