Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014832.1 Kokia drynarioides strain JFW-HI SEQ_129874, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75861

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--155
84
1.9
84
88
1
240
47
5
5
41
1.48
280--327
12
3.7
12
77
20
51
41
10
0
47
1.37
290--324
17
2.1
16
89
5
52
48
8
0
42
1.33
280--337
28
2.1
28
83
0
71
43
12
0
44
1.41
4217--4686
117
4.0
117
89
4
696
34
17
17
29
1.94
4217--4650
59
7.4
58
77
10
418
34
18
18
29
1.94
4217--4686
236
2.0
234
89
4
714
34
17
17
29
1.94
4693--4823
59
2.3
57
80
7
151
41
19
15
22
1.89
9364--9427
17
3.8
16
76
16
58
64
1
3
31
1.19
9364--9419
17
3.3
17
85
9
62
64
1
1
32
1.14
11023--11081
29
2.0
29
96
0
109
32
6
15
45
1.72
22236--22285
21
2.4
21
86
6
66
60
2
0
38
1.09
22236--22268
11
3.1
11
91
8
59
54
0
0
45
0.99
22237--22268
10
3.1
10
91
8
55
56
0
0
43
0.99
22344--22396
21
2.7
20
85
8
65
52
3
5
37
1.43
22874--22907
15
2.3
15
94
0
59
76
2
0
20
0.92
22904--22949
14
3.2
14
75
25
51
67
4
0
28
1.10
23507--23541
4
8.5
4
87
6
52
77
0
22
0
0.78
23493--23551
21
2.8
21
78
17
68
71
0
27
1
0.96
23507--23569
17
3.9
17
71
10
60
71
0
28
0
0.86
23504--23569
32
2.2
31
81
8
73
71
0
28
0
0.87
23906--23948
21
2.1
21
91
4
70
27
2
13
55
1.51
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24013--25996
997
2.0
987
100
0
3878
31
19
7
40
1.80
26038--26477
225
2.0
215
100
0
790
31
18
10
37
1.84
27221--27273
21
2.5
21
90
0
79
33
22
15
28
1.94
28048--28184
52
2.6
52
88
4
213
36
23
13
27
1.92
36854--37021
35
5.0
34
69
16
100
45
4
2
47
1.37
42272--42298
5
5.4
5
100
0
54
81
0
0
18
0.69
43506--43555
26
1.9
26
100
0
100
28
16
6
50
1.68
54064--54351
145
2.0
145
95
0
513
34
11
15
38
1.85
59636--59673
19
2.0
20
89
5
60
60
7
2
28
1.38
59988--60033
22
2.0
23
83
8
58
47
0
0
52
1.00
60949--60991
20
2.2
19
84
12
52
60
4
4
30
1.37
61747--62010
141
1.9
140
84
3
354
25
10
13
51
1.72
62264--62303
3
13.3
3
100
0
80
67
0
0
32
0.91
69714--69760
23
2.1
22
84
11
60
48
2
10
38
1.50
70359--70406
14
3.3
14
77
11
51
27
4
0
68
1.07
72417--72468
19
2.7
19
93
3
86
30
7
36
25
1.84
75525--75797
30
9.1
30
73
8
193
33
24
3
38
1.73
75525--75761
30
7.9
30
75
4
194
33
23
3
38
1.73
75525--75765
59
4.0
60
78
4
218
34
24
3
38
1.73
75531--75743
90
2.4
89
78
6
216
33
23
4
38
1.74
75798--75861
3
21.3
3
100
0
128
32
0
0
67
0.91

Tables:   1

The End!