Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01014838.1 Kokia drynarioides strain JFW-HI SEQ_129880, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 7989
ACGTcount: A:0.33, C:0.16, G:0.15, T:0.34

Warning! 200 characters in sequence are not A, C, G, or T


Found at i:6302 original size:6 final size:6

Alignment explanation


    Indices: 6293--6321  Score: 58
    Period size: 6  Copynumber: 4.8  Consensus size: 6

       6283 CTTAGAGGAG

                                             
       6293 CCCCAA CCCCAA CCCCAA CCCCAA CCCCA
          1 CCCCAA CCCCAA CCCCAA CCCCAA CCCCA

       6322 GCCAGTGTAG


Statistics
Matches: 23,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   23  1.00

ACGTcount: A:0.31, C:0.69, G:0.00, T:0.00


Consensus pattern (6 bp):   
CCCCAA

Done.