Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014841.1 Kokia drynarioides strain JFW-HI SEQ_129884, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  96636

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
999--1027
6
4.8
6
100
0
58
51
0
31
17
1.45
3051--3075
11
2.3
11
100
0
50
20
0
0
80
0.72
6145--6183
20
2.0
21
85
10
55
48
0
0
51
1.00
16314--16487
23
7.8
23
73
15
132
44
20
21
13
1.86
16353--16427
39
1.9
39
83
0
96
46
20
20
13
1.83
19371--19409
18
2.1
19
85
4
53
64
2
0
33
1.08
23141--23165
3
8.3
3
100
0
50
0
0
32
68
0.90
23548--23590
22
2.0
22
85
0
59
44
2
2
51
1.27
29440--29499
29
2.1
27
87
6
84
41
0
3
55
1.16
29461--29516
29
1.9
29
82
7
69
48
0
3
48
1.19
29524--29570
24
2.0
23
84
12
60
27
14
6
51
1.67
30172--30228
17
3.4
17
90
0
87
54
1
0
43
1.10
36762--36823
13
4.8
13
75
15
58
25
1
4
67
1.19
44937--44980
18
2.4
18
85
7
54
13
47
4
34
1.63
49374--49417
3
14.7
3
85
0
52
4
31
4
59
1.38
49380--49425
21
2.2
21
100
0
92
8
28
8
54
1.61
58464--58522
15
4.4
13
76
17
50
0
16
3
79
0.86
58464--58522
17
3.5
17
84
15
70
0
16
3
79
0.86
59104--59147
17
2.6
16
89
3
61
59
13
9
18
1.60
77701--77747
20
2.2
21
81
7
60
40
6
4
48
1.48
77920--77954
14
2.5
14
86
13
54
34
0
8
57
1.29
79917--79970
20
2.8
20
85
2
65
33
9
12
44
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86094--86168
20
3.8
20
71
15
57
34
5
13
46
1.66
86346--86383
18
2.1
19
90
5
60
60
0
0
39
0.97
86921--86960
16
2.4
16
83
4
53
47
5
0
47
1.24
87619--87643
12
2.1
12
100
0
50
28
0
8
64
1.22
88564--88693
35
3.7
35
75
5
102
26
25
20
27
1.99
93867--93951
41
2.1
41
100
0
170
65
4
11
17
1.41
94193--94337
29
4.9
30
77
11
122
35
3
26
33
1.74
94193--94337
59
2.5
59
79
13
156
35
3
26
33
1.74
94193--94354
30
5.5
28
78
12
132
35
3
25
35
1.72
94248--94366
29
4.1
28
77
11
80
33
2
28
35
1.71

Tables:   1

The End!