Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014842.1 Kokia drynarioides strain JFW-HI SEQ_129885, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  130246

Tables:   1   

This is table  1  of  1  ( 53 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
507--652
29
4.9
29
72
12
102
36
26
2
34
1.71
542--685
59
2.5
60
80
10
147
36
24
2
37
1.67
506--683
59
3.0
59
75
11
143
34
24
3
37
1.72
637--858
118
1.9
118
81
1
275
28
20
8
43
1.80
580--888
59
5.2
58
76
6
194
31
22
6
40
1.78
4823--4869
21
2.2
21
77
7
51
31
19
14
34
1.92
9266--9310
23
2.0
23
86
8
65
11
17
4
66
1.38
12239--12297
9
6.3
9
74
14
57
54
0
0
45
0.99
12208--12304
38
2.6
38
86
3
133
48
1
1
49
1.14
15760--15835
24
3.1
24
88
5
107
39
3
10
46
1.57
20340--20418
40
2.0
40
92
0
131
34
12
11
41
1.79
42756--42824
10
6.6
10
74
14
50
4
28
28
37
1.76
42745--42824
21
3.8
21
88
0
115
3
30
28
37
1.75
45483--45744
68
3.9
66
76
6
213
25
21
11
41
1.86
45483--45747
136
1.9
135
80
7
304
24
21
10
42
1.85
47587--47691
18
5.6
18
70
8
75
33
12
20
34
1.90
47593--47690
40
2.6
38
82
9
137
35
12
18
33
1.88
47822--47868
23
2.0
23
100
0
94
48
8
12
29
1.71
49307--49345
19
2.1
19
95
0
69
25
17
5
51
1.66
51637--51780
9
15.3
9
68
16
53
64
0
5
29
1.21
51686--51787
36
2.9
35
76
14
93
64
0
3
30
1.18
60360--60431
21
3.4
21
74
14
67
30
12
25
31
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65788--65841
24
2.3
23
80
6
63
40
3
0
55
1.17
68402--68621
111
2.0
110
87
7
322
48
16
12
22
1.79
69804--69969
52
3.2
52
89
2
253
28
13
22
34
1.93
70946--70974
14
2.0
15
93
6
51
48
6
24
20
1.74
71072--71269
109
1.9
108
86
4
276
48
17
12
21
1.79
72312--72344
11
3.0
11
100
0
66
9
45
0
45
1.35
77290--77430
69
2.0
69
100
0
282
49
11
8
30
1.68
77978--78023
13
3.7
12
85
2
56
23
0
2
73
0.94
78610--78674
31
2.0
31
82
5
76
53
7
4
33
1.50
80456--80785
171
1.9
170
90
2
527
30
15
26
26
1.96
85950--86011
32
2.0
31
81
15
74
43
11
4
40
1.62
87693--87740
17
2.8
17
84
6
53
47
0
6
45
1.27
87706--87746
21
1.9
22
85
5
57
43
0
4
51
1.23
87760--87798
18
2.3
18
86
8
55
43
2
23
30
1.67
89200--89248
21
2.3
21
79
6
55
28
22
14
34
1.93
98273--98297
12
2.1
12
100
0
50
92
8
0
0
0.40
103807--103832
12
2.2
12
100
0
52
26
0
30
42
1.56
105692--105978
59
4.9
56
79
8
243
35
8
23
32
1.85
105724--105977
29
8.7
27
72
13
139
35
6
23
34
1.80
105721--106003
117
2.4
117
85
3
381
36
6
24
33
1.81
105963--106075
29
3.8
29
77
11
122
37
4
24
33
1.76
105724--106064
58
5.8
59
77
10
317
36
6
24
33
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105755--106064
117
2.6
117
83
5
306
36
6
23
33
1.80
105971--106093
58
2.1
58
83
4
158
38
4
22
34
1.73
107943--107992
17
2.9
17
81
0
64
54
4
2
40
1.31
107961--108015
23
2.4
23
87
0
74
58
7
1
32
1.36
108948--108977
11
2.7
11
100
0
60
63
16
20
0
1.31
109242--109287
25
1.9
24
83
16
60
32
6
6
54
1.52
117701--117761
31
2.0
31
90
0
95
26
11
13
49
1.75
125083--125123
20
2.1
19
86
9
55
34
2
7
56
1.40
130214--130246
2
16.5
2
100
0
66
51
0
0
48
1.00

Tables:   1

The End!