Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014845.1 Kokia drynarioides strain JFW-HI SEQ_129888, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47364

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49--106
24
2.5
23
78
10
64
50
0
1
48
1.11
12781--12832
26
2.0
27
88
3
79
38
3
7
50
1.50
18222--18400
91
2.0
91
93
0
304
39
13
7
38
1.74
19009--19557
272
2.0
272
96
0
1008
35
15
16
32
1.89
20885--20917
2
16.5
2
100
0
66
48
0
0
51
1.00
23751--23790
6
6.7
6
100
0
80
32
0
15
52
1.43
25762--25810
17
2.8
18
78
6
55
57
2
0
40
1.10
26108--26151
14
3.1
14
77
9
54
47
0
0
52
1.00
30848--30893
22
2.1
21
88
4
65
28
0
36
34
1.58
30849--30893
21
2.1
21
88
8
56
28
0
35
35
1.58
30821--30921
51
2.0
50
84
5
132
28
4
32
33
1.79
30867--31221
29
12.1
28
72
13
232
30
1
30
37
1.69
30866--31271
59
6.9
59
85
1
501
30
1
29
38
1.68
32984--33020
15
2.5
15
84
16
51
24
0
29
45
1.53
33077--33179
6
17.8
6
73
15
92
47
0
3
47
1.27
33077--33164
17
4.8
17
76
21
88
45
0
4
50
1.22
33065--33179
41
2.8
41
93
1
187
46
0
5
47
1.31
33080--33179
11
8.7
11
74
15
69
48
1
4
47
1.27
33080--33179
17
5.8
17
79
11
82
48
1
4
47
1.27
33125--33179
23
2.4
23
82
8
69
50
1
1
45
1.22
33136--33190
11
5.0
11
75
14
51
56
1
1
40
1.21
33455--34055
204
2.9
204
92
0
968
19
22
19
37
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34524--34568
23
2.0
23
86
0
63
60
6
20
13
1.55
35404--35453
20
2.5
20
100
0
100
26
32
4
38
1.75
45806--46305
29
17.0
30
72
14
371
30
3
29
37
1.72
45807--46305
59
8.5
59
80
3
540
30
3
29
37
1.72

Tables:   1

The End!