Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001485.1 Kokia drynarioides strain JFW-HI SEQ_113021, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40329

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
205--336
23
5.5
25
79
8
125
14
23
19
42
1.88
205--308
23
4.4
23
84
6
129
13
22
21
43
1.87
218--353
69
2.0
68
85
8
186
14
22
19
43
1.87
3620--3667
17
2.7
19
84
12
59
18
10
0
70
1.15
8859--8907
18
2.8
17
84
6
62
83
4
12
0
0.77
8865--8895
6
5.2
6
100
0
62
83
0
16
0
0.64
8859--8908
12
4.4
11
85
5
55
84
4
12
0
0.76
9846--10185
50
6.9
49
74
6
231
34
15
30
19
1.93
9861--10131
50
5.4
50
77
4
253
33
15
31
18
1.93
9846--10185
99
3.4
98
83
3
387
34
15
30
19
1.93
11184--11208
13
1.9
13
100
0
50
32
0
4
64
1.12
11373--11398
12
2.2
12
100
0
52
26
0
0
73
0.84
11390--11422
13
2.3
15
90
10
52
42
3
0
54
1.15
26514--26604
12
7.8
12
69
17
66
27
14
18
39
1.89
26519--26610
23
4.0
23
92
0
148
28
13
18
40
1.88
26525--26627
23
4.5
23
88
2
91
31
11
17
39
1.85
26525--26628
46
2.3
46
84
3
129
30
11
18
39
1.86
35720--35789
21
3.3
21
75
11
63
30
24
14
31
1.94
36506--36558
24
2.2
24
83
6
72
30
18
20
30
1.97
39491--39536
25
1.9
23
86
8
65
34
4
4
56
1.39
39934--39979
13
3.6
13
80
11
51
80
2
10
6
0.98
39957--40025
19
3.5
20
78
21
67
78
1
14
5
1.01
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39957--40025
20
3.5
20
81
13
81
78
1
14
5
1.01
39937--40026
6
14.0
6
73
20
67
76
2
15
5
1.07

Tables:   1

The End!