Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014853.1 Kokia drynarioides strain JFW-HI SEQ_129896, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  115645

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
613--676
31
2.1
31
88
5
94
35
0
7
56
1.28
2696--2729
14
2.2
16
90
10
54
55
0
0
44
0.99
2699--2729
16
1.9
16
93
0
53
54
0
0
45
0.99
3502--3550
16
3.1
15
79
5
53
20
0
8
71
1.11
3514--3555
13
3.1
14
80
10
52
19
0
9
71
1.13
11110--11144
16
2.1
17
94
5
63
80
5
11
2
1.00
15518--15564
24
2.0
23
83
4
58
65
2
2
29
1.15
16220--16254
15
2.2
16
90
5
54
25
0
0
74
0.82
18160--18207
23
2.1
23
88
3
71
45
0
0
54
0.99
28417--28480
31
2.1
29
81
16
69
46
1
1
50
1.20
28441--28534
23
4.0
23
69
14
66
46
0
2
51
1.13
28920--28987
29
2.3
30
87
2
93
45
11
10
32
1.74
28939--29008
29
2.3
29
85
4
86
40
12
11
35
1.80
36898--36936
18
2.2
18
90
0
60
33
17
2
46
1.62
41473--41536
28
2.3
28
73
7
69
42
9
0
48
1.35
41830--41893
28
2.2
29
83
8
78
39
0
0
60
0.97
41830--41893
29
2.2
28
83
8
76
39
0
0
60
0.97
43342--43403
23
2.6
24
80
7
65
64
1
1
32
1.13
45896--45949
28
1.9
28
85
14
76
40
1
0
57
1.09
45935--46045
18
6.0
18
69
15
57
36
4
2
56
1.34
45961--46062
9
11.0
9
68
10
62
34
3
3
57
1.35
46092--46141
20
2.5
20
83
6
57
30
4
4
62
1.32
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
80029--80056
7
4.0
7
100
0
56
14
0
0
85
0.59
82193--82223
15
2.1
15
93
0
53
0
16
0
83
0.64
83808--83877
30
2.3
31
83
16
92
55
1
0
42
1.08
91204--91295
36
2.6
36
79
6
96
40
25
14
20
1.90
103914--103938
8
3.1
8
100
0
50
12
0
0
88
0.53
105637--105740
52
2.0
52
100
0
208
48
15
11
25
1.78
109860--109943
42
2.0
42
85
0
114
19
11
23
45
1.83
110575--110669
48
2.0
48
83
4
120
23
23
8
45
1.80
110757--110829
29
2.5
30
78
8
80
36
10
10
41
1.76
111013--111069
29
1.9
30
85
3
80
50
10
5
33
1.59
112525--112879
176
2.0
178
96
1
660
41
12
10
35
1.77
114017--114091
39
1.9
39
86
5
107
24
21
21
33
1.97

Tables:   1

The End!