Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014859.1 Kokia drynarioides strain JFW-HI SEQ_129902, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  102016

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--2182
281
7.9
280
74
10
1746
36
15
15
32
1.90
1053--1555
252
2.0
249
81
3
587
38
13
15
32
1.86
9056--9129
31
2.3
31
93
4
121
44
9
14
31
1.77
9076--9144
31
2.2
31
84
0
84
49
11
11
27
1.74
12929--12959
16
1.9
16
100
0
62
19
25
12
41
1.87
15022--15068
17
2.8
17
83
0
58
65
4
2
27
1.22
19416--19452
18
2.0
20
89
10
60
24
27
5
43
1.76
20385--20414
15
2.0
15
100
0
60
53
0
0
46
1.00
21322--21346
13
1.9
13
100
0
50
84
0
0
16
0.63
26840--26915
34
2.3
33
77
11
84
65
10
0
23
1.23
29251--29296
23
2.0
23
83
8
58
26
2
2
69
1.11
29472--29511
21
2.0
19
90
9
62
55
7
2
35
1.42
29468--29516
21
2.4
22
80
19
61
59
6
2
32
1.34
33703--33753
24
2.1
24
89
7
77
47
5
0
47
1.26
36755--36819
32
2.0
32
100
0
130
24
15
15
44
1.85
40422--40483
29
2.1
31
87
6
92
33
3
16
46
1.63
42369--42671
79
3.8
79
85
1
394
33
25
17
24
1.97
43016--43047
2
16.0
2
100
0
64
50
0
0
50
1.00
43751--43949
91
2.2
91
81
3
240
47
9
8
35
1.66
51407--51457
26
2.0
26
92
0
84
27
25
17
29
1.98
58390--58435
21
2.1
22
88
11
69
58
10
4
26
1.50
62155--62179
12
2.1
12
100
0
50
32
8
28
32
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62899--62957
24
2.5
23
83
10
66
40
0
0
59
0.97
80306--80339
12
2.8
12
86
0
50
41
52
5
0
1.25
84740--84782
15
2.7
15
82
7
50
65
2
2
30
1.18
85871--85911
20
2.1
19
86
4
55
36
2
4
56
1.34
85937--85996
26
2.4
25
88
5
93
38
1
6
53
1.37
85945--85982
20
1.9
20
89
10
60
36
2
7
52
1.45
85996--86036
21
2.0
21
90
0
64
36
12
7
43
1.70
87251--87284
17
2.1
17
88
5
52
61
14
2
20
1.46
88233--88484
29
8.5
29
77
4
209
34
23
2
39
1.70
88269--88484
88
2.4
88
82
5
231
35
23
2
38
1.67
88273--88482
59
3.6
58
79
8
167
35
22
1
39
1.66
97195--97830
149
4.3
149
77
5
473
33
16
31
18
1.93
97164--97968
50
16.2
48
72
7
414
34
17
31
17
1.93
97164--97968
99
8.1
99
78
4
633
34
17
31
17
1.93
98840--98884
22
2.0
22
83
8
56
62
13
13
11
1.55
101972--102015
17
2.6
16
79
10
52
50
4
2
43
1.35

Tables:   1

The End!