Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014872.1 Kokia drynarioides strain JFW-HI SEQ_129915, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46587

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4913--5020
45
2.4
45
83
6
130
27
10
5
56
1.55
7018--7051
17
2.0
17
88
0
50
29
2
14
52
1.56
17874--18060
97
1.9
97
82
6
236
39
14
16
29
1.88
18324--18663
58
5.8
57
81
7
317
37
5
24
32
1.77
18383--18664
29
9.6
31
69
18
135
38
4
24
32
1.77
18324--18663
118
2.9
116
81
6
366
37
5
24
32
1.77
18324--18631
29
10.6
28
69
17
137
37
4
24
33
1.77
20780--20870
46
2.0
47
89
6
141
26
15
31
26
1.96
21143--21780
49
13.0
49
75
9
568
15
23
20
39
1.91
21114--21780
98
6.8
98
90
1
982
16
23
20
40
1.91
22679--22755
19
4.3
18
75
17
79
0
20
2
76
0.90
22678--22760
22
3.8
22
74
13
73
0
20
2
77
0.89
22679--22760
6
13.5
6
75
10
60
0
20
2
76
0.89
27401--27579
97
1.8
98
82
5
229
39
15
16
27
1.89
27870--28065
29
6.7
30
70
15
117
41
3
23
31
1.70
27866--28063
59
3.4
60
84
5
246
39
3
24
32
1.71
27791--28034
29
8.3
29
70
15
119
36
4
25
33
1.78
27866--28065
30
6.8
30
70
16
127
40
3
24
32
1.70
27840--28073
30
7.9
31
66
20
110
39
2
25
32
1.71
27986--28081
29
3.2
30
77
15
94
38
1
27
33
1.64
43999--44041
18
2.4
18
88
7
61
46
0
0
53
1.00

Tables:   1

The End!