Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014874.1 Kokia drynarioides strain JFW-HI SEQ_129917, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  125808

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5902--5966
27
2.4
27
97
0
121
15
13
30
40
1.86
6263--6363
50
2.0
50
100
0
202
28
7
25
37
1.84
10566--10606
22
1.9
22
85
5
57
65
9
7
17
1.44
13437--13522
31
2.8
31
77
10
95
20
3
5
69
1.24
13851--13892
7
6.0
7
100
0
84
28
28
14
28
1.95
14957--15054
41
2.4
41
84
0
133
30
21
26
21
1.98
17017--17058
16
2.8
16
82
10
52
64
4
30
0
1.14
17425--17460
18
2.1
18
89
5
56
41
0
25
33
1.55
17949--17990
9
4.8
9
80
13
52
35
0
0
64
0.94
18736--18802
6
11.7
6
74
15
61
52
1
0
46
1.09
18738--18802
17
3.8
17
89
0
103
53
1
0
44
1.09
18734--18787
23
2.3
23
78
12
58
51
1
0
46
1.11
20515--20639
23
5.4
23
84
6
157
45
21
20
12
1.84
24668--24698
15
2.1
15
94
5
55
58
0
0
41
0.98
25781--25813
11
3.1
11
82
8
50
33
0
3
63
1.10
25782--25822
21
2.0
21
85
0
55
36
0
2
60
1.10
26825--26869
12
3.8
12
84
0
54
71
20
2
6
1.20
26896--26941
22
2.0
22
91
4
74
69
15
4
10
1.32
27572--27602
16
1.9
16
100
0
62
38
0
6
54
1.26
38113--38162
17
2.8
17
84
6
64
32
32
18
18
1.94
41118--41211
45
2.1
46
88
6
138
23
6
9
60
1.51
43436--43490
21
2.7
20
82
2
56
9
5
21
63
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43483--43537
12
4.7
12
79
2
58
10
1
20
67
1.30
43494--43576
12
7.2
12
73
13
50
8
3
16
71
1.26
43481--43592
23
5.0
22
73
15
88
8
2
18
69
1.27
59988--60103
61
1.9
59
94
3
205
43
8
12
36
1.73
65199--65242
18
2.5
17
82
13
54
40
6
0
52
1.28
65595--65653
28
2.1
28
100
0
118
47
10
6
35
1.64
65897--65938
17
2.4
17
88
4
57
26
11
2
59
1.45
71480--72433
81
11.8
81
87
0
1262
30
24
17
27
1.97
73055--73089
8
4.4
8
89
10
54
34
0
0
65
0.93
73052--73088
15
2.4
16
95
4
67
37
0
0
62
0.96
73052--73095
15
2.9
15
86
3
61
34
0
0
65
0.93
83955--83982
9
3.1
9
100
0
56
42
10
0
46
1.38
88605--88679
24
3.1
23
78
14
80
25
21
24
29
1.99
88605--88704
48
2.1
49
84
5
132
24
20
24
32
1.98
89649--90703
524
2.0
526
92
0
1772
41
17
12
28
1.86
90834--91006
40
4.3
40
79
4
188
41
14
22
21
1.90
90819--91007
79
2.4
80
84
0
245
40
15
22
22
1.91
95919--95951
16
1.9
18
88
11
52
9
3
27
60
1.42
96053--96117
32
2.0
32
100
0
130
24
12
6
56
1.58
96694--96769
34
2.2
34
90
0
125
52
0
18
28
1.45
107118--107161
16
2.7
16
85
3
61
31
2
18
47
1.61
122720--122760
18
2.3
18
82
0
55
41
2
0
56
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
122734--122810
23
3.3
22
73
22
68
36
5
1
57
1.30
122729--122780
19
2.7
20
79
8
54
38
5
0
55
1.24
122998--123045
18
2.6
19
80
6
62
62
0
4
33
1.14

Tables:   1

The End!