Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014877.1 Kokia drynarioides strain JFW-HI SEQ_129920, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  205558

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3043--3131
21
4.1
21
79
5
81
57
10
19
13
1.64
5947--6032
29
2.9
30
74
8
86
44
15
5
34
1.70
11016--11067
27
1.9
27
96
0
95
40
9
3
46
1.55
14565--14615
22
2.4
20
76
20
50
56
5
1
35
1.35
19098--19162
33
2.0
33
100
0
130
44
3
21
30
1.67
31365--31434
31
2.3
30
70
4
70
32
10
14
42
1.78
32526--32576
26
2.0
26
92
0
84
62
3
1
31
1.24
37828--37988
82
2.0
82
97
0
304
31
16
18
34
1.93
49417--49534
49
2.4
49
92
5
202
44
11
9
34
1.73
53731--53784
27
2.0
27
85
7
74
29
1
24
44
1.64
53861--53909
21
2.2
21
80
16
55
61
2
8
28
1.36
54372--54471
51
2.0
51
91
0
164
38
7
19
36
1.78
56037--56079
16
2.7
16
81
0
50
27
23
9
39
1.85
70971--71124
56
2.7
56
82
6
184
24
14
12
49
1.77
85276--85318
22
2.0
21
81
4
50
58
2
32
6
1.38
86123--86147
11
2.3
11
100
0
50
44
0
0
56
0.99
87424--87480
30
1.9
30
82
13
73
43
0
3
52
1.18
90913--90952
15
2.7
15
85
11
55
60
2
0
37
1.11
91059--91099
17
2.3
19
87
8
59
56
2
0
41
1.13
111549--111654
44
2.4
44
88
0
149
29
20
18
31
1.97
132450--132542
31
3.2
30
67
14
77
22
8
16
52
1.70
138269--138338
25
2.9
24
79
8
79
57
2
0
40
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
139792--139847
28
2.0
27
90
10
87
64
3
1
30
1.21
156345--156413
31
2.2
31
89
5
104
26
26
18
28
1.98
158842--158866
9
2.8
9
100
0
50
12
12
24
52
1.72
159090--159165
31
2.5
30
79
10
84
38
11
13
36
1.81
159812--159852
16
2.5
17
76
7
50
41
0
2
56
1.13
160395--160435
2
20.5
2
100
0
82
48
0
0
51
1.00
163476--163530
27
2.0
27
96
0
101
43
12
10
32
1.78
166774--166813
19
2.1
19
85
4
53
42
12
27
17
1.85
192864--192910
18
2.6
17
77
9
58
36
0
2
61
1.08
198200--198357
78
2.0
78
100
0
316
27
15
21
34
1.94
200133--200180
25
2.0
25
87
4
71
31
2
2
64
1.16
201509--201550
20
2.0
21
81
4
50
57
0
4
38
1.20
203619--203669
21
2.4
22
78
15
61
60
15
7
15
1.56

Tables:   1

The End!