Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014891.1 Kokia drynarioides strain JFW-HI SEQ_129934, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84876

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
273--504
29
8.1
29
76
10
183
49
9
18
22
1.76
281--504
86
2.6
87
84
4
285
50
10
17
22
1.76
352--502
59
2.6
58
78
8
175
50
11
16
21
1.77
2897--2936
13
3.0
13
85
3
53
30
7
15
47
1.72
5183--5215
16
2.1
15
94
5
57
51
6
0
42
1.26
8268--8300
17
1.9
17
88
11
50
27
0
6
66
1.15
8495--8650
50
3.1
50
78
11
174
35
14
12
37
1.84
18990--19041
26
2.0
26
96
0
95
21
30
7
40
1.81
22231--22330
33
3.0
33
89
0
137
30
20
23
27
1.98
32892--32933
17
2.4
17
88
11
59
7
14
2
76
1.10
37526--37576
24
2.1
24
100
0
102
41
7
27
23
1.82
41378--41430
15
3.5
16
77
12
58
26
20
28
24
1.99
45737--45779
14
3.2
14
84
15
56
0
32
0
67
0.91
45812--45845
17
2.0
17
88
0
50
8
8
0
82
0.85
54180--54215
18
2.1
18
89
5
56
33
25
0
41
1.55
58700--58755
23
2.4
23
79
5
60
80
3
14
1
0.93
59309--59349
8
4.7
9
82
11
50
85
0
12
2
0.70
59317--59351
18
2.0
18
94
5
63
82
0
11
5
0.82
59753--60174
42
10.0
41
85
4
488
22
18
23
36
1.95
59753--60174
126
3.4
125
86
2
551
22
18
23
36
1.95
60614--60644
3
10.3
3
100
0
62
35
0
0
64
0.94
61000--61161
51
3.2
49
72
15
132
44
2
8
45
1.46
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60999--61211
102
2.1
102
88
1
311
42
3
7
46
1.49
61030--61211
51
3.6
51
74
6
172
42
2
7
46
1.46
61228--61268
20
2.1
20
86
4
57
58
0
7
34
1.26
61295--61354
27
2.0
30
81
15
72
38
1
5
55
1.32
61143--61407
147
1.8
145
86
4
390
43
2
9
44
1.49
62168--62213
18
2.6
18
86
6
58
28
15
0
56
1.39
63403--63435
16
2.1
15
94
5
57
51
6
0
42
1.26
64524--64579
20
3.0
20
84
7
64
39
0
0
60
0.97
69329--69432
36
2.9
36
88
0
154
37
13
25
24
1.91
69827--69853
12
2.2
12
100
0
54
29
0
18
51
1.46
73317--73375
22
2.7
22
94
0
100
27
23
3
45
1.68
73317--73375
12
5.2
12
68
15
54
27
23
3
45
1.68

Tables:   1

The End!