Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014894.1 Kokia drynarioides strain JFW-HI SEQ_129937, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  206476

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5771--5799
6
4.8
6
100
0
58
34
13
0
51
1.42
15305--15329
5
5.0
5
100
0
50
0
20
0
80
0.72
24528--24566
15
2.8
14
85
11
53
69
0
2
28
1.02
27559--27669
56
2.0
55
85
5
152
53
9
8
28
1.63
33588--33627
16
2.5
16
92
8
64
45
0
5
50
1.23
39127--39489
179
2.0
180
92
1
613
27
15
17
39
1.90
40733--40786
22
2.5
22
100
0
72
42
16
11
29
1.83
60791--60872
41
2.0
41
92
4
139
31
9
23
35
1.87
62901--62931
12
2.6
12
94
0
53
32
41
9
16
1.80
69192--69251
31
2.0
31
86
3
86
46
10
1
41
1.47
71804--71924
54
2.2
54
84
5
147
22
28
23
25
1.99
77911--77995
44
1.9
44
80
4
100
43
11
3
41
1.58
78087--78143
25
2.3
26
75
9
64
61
3
0
35
1.13
78348--78410
29
2.2
29
83
16
78
52
4
0
42
1.22
78792--78859
31
2.3
29
78
14
75
39
0
1
58
1.07
78799--78903
54
1.9
54
90
3
167
36
0
3
60
1.15
81834--81869
15
2.4
15
90
0
54
36
36
25
2
1.70
85783--85823
6
6.8
6
82
0
55
46
12
2
39
1.54
85783--85823
12
3.4
12
93
0
64
46
12
2
39
1.54
85939--85976
3
12.7
3
83
10
51
36
34
26
2
1.71
86172--86335
80
2.0
80
96
0
301
38
9
16
35
1.80
88618--88897
76
3.7
76
82
5
314
31
22
20
25
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
90213--90255
18
2.4
18
82
17
54
34
4
2
58
1.32
101571--101608
7
5.3
7
84
15
51
47
0
50
2
1.15
101570--101609
15
2.8
14
85
14
55
50
0
47
2
1.14
109613--109680
33
2.1
33
83
8
86
50
4
0
45
1.22
110510--110551
21
2.0
21
95
0
75
26
23
14
35
1.93
113867--113895
2
15.0
2
92
7
51
51
0
0
48
1.00
115857--115888
2
16.5
2
93
6
57
50
0
0
50
1.00
116112--116146
16
2.2
16
100
0
70
77
0
5
17
0.96
121516--121576
29
2.1
29
81
6
70
36
1
8
54
1.40
148006--148045
20
2.0
21
90
5
64
55
2
0
42
1.13
163035--163092
14
4.1
14
78
8
64
24
5
0
70
1.07
163035--163092
28
2.1
28
87
6
82
24
5
0
70
1.07
169870--169895
3
8.7
3
100
0
52
34
0
30
34
1.58
175998--176204
104
2.0
104
98
0
396
42
22
16
18
1.89
184459--184492
17
1.9
18
94
5
61
41
26
2
29
1.70
185232--185395
82
2.0
82
98
0
319
46
10
14
28
1.78
185253--185417
82
2.0
82
85
2
208
52
8
14
24
1.70
185955--185992
19
2.0
20
94
5
69
52
0
0
47
1.00
187023--187076
24
2.2
26
83
6
67
51
0
3
44
1.19
187029--187079
26
2.0
24
88
7
75
52
0
0
47
1.00
187473--187513
18
2.2
19
86
4
57
48
2
0
48
1.14

Tables:   1

The End!