Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014895.1 Kokia drynarioides strain JFW-HI SEQ_129938, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  154167

Tables:   1   

This is table  1  of  1  ( 48 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4016--4058
20
2.2
20
100
0
86
18
9
9
62
1.51
11949--12060
45
2.5
45
94
0
188
17
21
8
52
1.70
12986--13020
2
17.5
2
100
0
70
48
0
0
51
1.00
13740--13785
19
2.4
19
96
0
83
34
4
34
26
1.76
24136--24178
19
2.3
20
88
11
65
58
4
0
37
1.19
31665--31702
15
2.4
17
82
8
53
63
0
0
36
0.95
31652--31702
15
3.3
15
81
10
50
66
1
0
31
1.03
35735--35775
22
1.9
21
85
14
57
68
0
7
24
1.15
36137--36218
35
2.3
34
75
19
78
39
6
4
50
1.49
38725--38785
24
2.5
24
89
0
95
52
8
9
29
1.63
43505--43604
23
4.3
23
93
0
164
11
22
24
43
1.85
44894--44993
23
4.3
23
93
0
164
11
22
24
43
1.85
46207--46296
43
2.1
43
100
0
180
32
17
28
21
1.96
54076--54114
18
2.1
19
85
4
53
53
5
0
41
1.23
59850--59895
2
23.0
2
100
0
92
50
0
0
50
1.00
60262--60303
19
2.2
19
86
0
57
30
2
9
57
1.44
62408--62471
30
2.1
30
97
0
119
57
6
10
25
1.56
62405--62483
30
2.6
30
86
11
117
53
5
12
29
1.60
67765--67882
4
29.0
4
82
3
119
27
1
4
66
1.20
71435--71469
2
17.5
2
100
0
70
51
0
0
48
1.00
72310--72357
24
2.0
24
100
0
96
54
0
0
45
0.99
72308--72349
11
3.6
11
81
12
57
52
0
0
47
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75492--75591
31
3.1
30
74
9
92
30
7
10
53
1.61
77009--77204
31
6.4
30
66
21
104
47
12
14
25
1.79
78851--78901
23
2.2
25
82
10
63
43
7
0
49
1.32
81174--81274
54
2.0
49
81
14
116
31
9
5
52
1.59
81471--81524
24
2.4
24
84
9
69
53
1
1
42
1.22
91001--91048
25
2.0
25
87
4
71
45
2
8
43
1.45
104985--105018
17
2.0
17
88
0
50
50
2
0
47
1.16
114465--114490
8
3.2
8
100
0
52
46
0
0
53
1.00
118022--118055
16
2.0
18
88
11
54
47
2
2
47
1.32
118299--118330
2
16.0
2
93
0
55
53
0
0
46
1.00
118735--118772
16
2.4
16
86
0
58
55
10
2
31
1.48
120916--121021
23
4.7
22
74
5
86
13
21
25
39
1.90
131364--131414
24
2.1
24
92
0
84
54
11
11
21
1.68
133547--133630
37
2.3
37
93
0
141
8
22
30
38
1.84
133602--133652
21
2.4
21
90
0
75
7
23
29
39
1.83
141637--141672
18
1.9
19
94
5
65
47
0
5
47
1.25
142342--142388
23
2.0
23
95
0
85
40
4
10
44
1.59
144512--144606
27
3.4
27
89
4
136
17
33
9
38
1.82
145233--145273
18
2.3
18
84
12
50
41
4
0
53
1.22
145876--145944
34
2.0
34
100
0
138
28
11
8
50
1.68
145879--145934
17
3.3
17
65
9
51
30
8
8
51
1.64
145927--146035
54
1.9
56
80
10
125
29
10
7
53
1.61
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
146347--146382
19
1.9
18
88
5
54
38
0
2
58
1.13
147851--147909
19
3.1
19
78
9
57
55
5
3
35
1.38
147892--147962
33
2.2
33
97
0
133
60
4
5
29
1.38
148289--148347
28
2.0
29
80
6
66
32
3
3
61
1.29

Tables:   1

The End!