Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014897.1 Kokia drynarioides strain JFW-HI SEQ_129940, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83570

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2747--2804
24
2.5
23
78
10
64
50
0
1
48
1.11
3086--3127
21
2.0
20
82
17
50
45
0
11
42
1.41
12343--12390
16
3.1
15
80
11
53
52
2
2
43
1.24
24917--25033
23
5.2
22
75
18
80
66
21
4
7
1.34
24929--25033
23
4.6
21
73
17
84
67
20
4
6
1.32
24930--25022
12
7.9
12
75
4
82
68
19
4
7
1.31
24930--25033
35
3.0
35
77
5
102
67
21
4
6
1.33
24960--25033
12
6.2
12
76
3
69
68
18
5
6
1.31
27366--27398
17
1.9
17
100
0
66
24
12
15
48
1.78
35282--35352
36
2.0
36
86
5
101
39
15
5
39
1.71
41288--41546
134
1.9
134
85
2
358
35
16
19
28
1.94
41814--41857
21
2.1
21
86
0
61
47
6
4
40
1.50
41926--42342
134
3.1
131
78
8
360
36
9
20
33
1.86
42017--42369
133
2.6
134
80
6
347
38
11
19
30
1.87
42481--42520
21
2.0
20
85
5
53
72
2
25
0
0.97
45045--45097
23
2.3
22
84
9
70
26
3
5
64
1.33
45706--45739
16
2.1
17
88
5
52
50
0
0
50
1.00
45729--45785
17
3.5
15
77
15
51
33
1
5
59
1.30
45849--45885
16
2.3
16
90
9
58
27
8
0
64
1.21
45976--46007
7
4.7
7
96
3
57
46
0
9
43
1.35
49202--49279
27
2.8
27
78
18
72
46
1
5
47
1.33
51063--51551
202
2.4
201
82
3
599
32
12
16
38
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60238--60280
21
2.0
21
95
0
77
34
25
0
39
1.56
60292--60316
3
8.3
3
100
0
50
32
0
0
68
0.90
61195--61252
30
2.0
30
82
3
73
34
12
6
46
1.68
65667--65701
17
2.1
17
88
0
52
68
5
0
25
1.11
65772--65825
20
2.7
20
80
13
65
48
1
5
44
1.37
65772--65825
21
2.7
19
78
13
63
48
1
5
44
1.37
72720--73253
267
2.0
267
89
1
811
37
22
17
21
1.94
75996--76036
22
1.9
21
85
5
55
43
2
12
41
1.55
78362--78440
29
2.7
29
92
0
122
31
12
26
29
1.93
78536--78852
29
10.8
29
76
12
258
38
3
23
34
1.72
78389--78841
146
3.1
147
78
9
351
37
4
23
33
1.76
78535--78842
59
5.2
61
78
10
263
39
3
23
33
1.72
78535--78754
89
2.5
90
82
11
260
37
3
26
32
1.74
78789--78884
32
3.1
32
78
12
94
39
4
16
39
1.68
80455--80507
11
4.6
11
79
6
61
54
0
1
43
1.11

Tables:   1

The End!