Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014901.1 Kokia drynarioides strain JFW-HI SEQ_129944, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  101697

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7899--7947
24
2.0
24
100
0
98
28
20
8
42
1.80
22313--22353
21
1.9
22
90
5
66
24
0
26
48
1.51
31639--31681
20
2.2
20
86
0
59
18
20
9
51
1.74
34188--34336
79
1.9
78
86
5
212
42
10
2
44
1.53
54111--54171
30
2.0
30
100
0
122
16
19
9
54
1.70
60465--60564
52
1.9
51
86
11
141
43
2
5
50
1.35
62868--62941
25
3.0
24
70
20
64
22
12
2
62
1.42
62870--62943
23
3.1
23
69
14
60
21
12
2
63
1.40
62870--62979
47
2.4
48
86
4
145
21
15
2
60
1.48
63053--63113
19
3.3
18
72
9
52
8
29
4
57
1.49
63048--63117
36
1.9
37
91
2
115
10
27
4
58
1.49
63068--63127
19
3.3
19
71
15
54
10
26
3
60
1.45
64997--65202
91
2.3
89
82
4
245
39
16
8
35
1.80
65299--65368
19
3.9
17
75
15
54
25
1
1
71
1.03
72305--72343
19
2.0
19
90
5
60
23
12
0
64
1.28
73701--73729
2
14.5
2
100
0
58
48
0
0
51
1.00
79381--79419
20
2.0
21
85
10
55
79
2
12
5
1.00
81660--81747
43
2.0
43
100
0
176
45
29
4
20
1.71
84447--84559
56
2.0
56
96
0
208
39
9
12
38
1.76
94309--94393
43
2.0
43
83
4
109
31
11
10
45
1.75
94945--95081
45
3.0
45
82
2
141
34
25
19
20
1.96
96453--96501
4
12.2
4
89
8
73
2
26
0
71
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
98334--98360
12
2.2
12
100
0
54
33
7
44
14
1.73

Tables:   1

The End!