Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014905.1 Kokia drynarioides strain JFW-HI SEQ_129948, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  291145

Tables:   1   

This is table  1  of  1  ( 63 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11320--11372
14
3.8
14
73
9
54
39
0
9
50
1.35
15249--15315
27
2.4
28
82
2
91
31
25
8
34
1.87
27381--27430
18
2.8
18
81
0
64
32
22
22
24
1.98
35524--35552
2
15.0
2
92
7
51
48
0
0
51
1.00
36178--36203
11
2.4
11
100
0
52
38
15
0
46
1.46
40863--40977
41
2.8
41
77
3
117
27
16
23
32
1.96
53310--53336
3
9.0
3
100
0
54
33
33
0
33
1.58
64081--64105
7
3.6
7
100
0
50
40
0
0
60
0.97
64373--64413
16
2.6
16
88
0
55
56
0
0
43
0.99
64792--64825
17
2.0
17
94
0
59
44
0
2
52
1.16
65559--65596
16
2.3
17
90
4
60
39
0
2
57
1.12
68011--68051
6
6.8
6
83
10
57
17
2
14
65
1.37
68117--68174
26
2.2
26
81
6
73
56
12
0
31
1.35
68125--68181
26
2.2
26
81
6
62
59
8
1
29
1.38
69754--69800
23
2.0
23
91
0
76
36
10
10
42
1.74
70982--71030
25
2.0
25
88
8
73
18
24
4
53
1.62
79380--79763
59
6.4
58
72
12
269
24
18
18
39
1.92
79420--79750
181
1.8
178
80
10
397
25
16
17
40
1.90
79380--79763
118
3.2
117
77
10
368
24
18
18
39
1.92
83441--83488
12
3.7
12
75
20
51
52
0
8
39
1.32
83603--83820
88
2.5
86
90
4
359
44
5
4
46
1.44
83913--83973
22
2.7
23
82
5
63
40
27
4
26
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86251--86342
30
3.1
30
90
0
130
29
8
1
60
1.33
86294--86348
17
3.5
17
73
19
64
27
14
0
58
1.37
87148--87447
61
5.0
60
79
8
272
42
15
14
27
1.86
87261--87445
58
3.1
57
79
14
180
43
16
14
25
1.85
87322--87594
55
4.9
55
74
16
154
38
16
15
30
1.89
93210--93270
21
3.0
20
76
7
68
54
14
8
22
1.67
93199--93263
21
3.1
21
78
10
71
60
10
7
21
1.55
99200--99241
2
21.0
2
95
0
75
47
0
2
50
1.14
115156--115182
3
9.0
3
100
0
54
33
66
0
0
0.92
120557--120586
3
10.0
3
100
0
60
66
0
0
33
0.92
121595--121623
3
9.7
3
100
0
58
31
0
0
68
0.89
122937--122967
2
15.5
2
93
0
53
51
0
3
45
1.17
145706--146368
228
2.9
227
82
3
740
30
26
22
20
1.98
154133--154171
5
7.8
5
100
0
78
20
0
61
17
1.34
154332--154359
7
4.0
7
100
0
56
57
28
0
14
1.38
155449--155487
20
2.0
20
85
10
53
41
7
7
43
1.62
167310--167373
13
4.9
13
76
14
53
45
10
4
39
1.60
174355--174391
18
2.1
18
100
0
74
16
16
32
35
1.91
180429--180470
20
2.0
20
82
13
50
50
2
2
45
1.27
189664--189706
18
2.4
18
84
3
61
27
0
9
62
1.25
194384--194418
6
5.8
6
93
0
61
31
31
34
2
1.73
201141--201192
18
2.8
18
72
13
52
40
0
0
59
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
201792--201821
15
2.0
15
93
0
51
70
0
0
30
0.88
202927--202955
2
15.0
2
92
7
51
48
0
0
51
1.00
203620--203645
3
8.7
3
100
0
52
30
0
0
69
0.89
209354--209378
5
5.0
5
100
0
50
60
0
0
40
0.97
231295--231330
17
2.1
17
89
0
54
2
33
0
63
1.08
231297--231341
20
2.2
20
88
0
63
4
33
0
62
1.15
231292--231342
20
2.8
17
75
16
57
5
29
0
64
1.17
234344--234392
19
2.6
19
80
6
55
32
0
2
65
1.04
235451--235483
6
5.5
6
100
0
66
15
18
18
48
1.81
237845--237879
19
1.9
19
88
11
56
8
11
0
80
0.92
241205--241262
21
2.7
21
86
7
73
39
6
17
36
1.76
241272--241320
22
2.2
22
82
7
55
20
0
6
73
1.04
245446--245498
22
2.2
25
78
18
60
39
5
1
52
1.36
247681--247714
6
5.7
6
89
0
50
17
32
20
29
1.96
251725--251799
33
2.3
34
86
9
102
38
10
22
28
1.87
269827--269877
17
2.8
18
76
21
52
50
1
0
47
1.12
275729--275763
17
2.0
18
88
5
54
54
0
0
45
0.99
281668--281711
22
2.1
21
83
8
54
36
2
0
61
1.09
287131--287183
15
3.4
15
77
10
52
37
1
0
60
1.08

Tables:   1

The End!