Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014906.1 Kokia drynarioides strain JFW-HI SEQ_129949, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  242657

Tables:   1   

This is table  1  of  1  ( 55 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6530--6562
16
2.1
16
88
5
50
69
0
3
27
1.03
6556--6617
22
2.8
22
77
2
70
45
1
6
46
1.38
6865--6916
27
2.0
27
84
3
70
34
1
1
61
1.18
32491--32543
23
2.2
25
90
6
83
49
0
16
33
1.47
32508--32556
23
2.1
23
88
3
71
46
4
12
36
1.60
40231--40271
21
2.0
21
85
9
57
19
2
4
73
1.13
50992--51028
2
18.5
2
100
0
74
51
0
48
0
1.00
52536--52622
43
2.0
43
100
0
174
35
11
13
39
1.81
69466--69549
30
2.6
33
77
15
86
50
2
0
47
1.14
77758--77783
12
2.2
12
100
0
52
92
0
7
0
0.39
80154--80203
25
2.0
25
96
0
91
30
20
4
46
1.69
85604--85694
45
2.0
46
84
6
121
50
4
6
38
1.48
85604--85696
48
2.0
48
81
8
111
50
4
7
37
1.50
98189--98228
16
2.5
16
84
8
55
55
2
0
42
1.13
98242--98291
23
2.2
23
85
3
66
56
18
2
24
1.52
98250--98298
23
2.1
23
100
0
98
53
20
0
26
1.46
101508--101540
3
11.0
3
93
0
57
0
33
3
63
1.10
101936--102205
134
2.0
134
98
0
522
34
19
13
32
1.91
113189--113217
2
14.5
2
100
0
58
51
0
48
0
1.00
114212--114261
18
2.8
18
71
17
50
60
2
2
36
1.20
122510--122539
14
2.2
13
94
5
51
43
0
0
56
0.99
127543--127586
19
2.2
19
88
12
61
45
2
4
47
1.35
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
127663--127712
23
2.1
24
78
14
59
42
2
8
48
1.44
130859--130899
18
2.3
18
100
0
82
36
21
4
36
1.75
141328--141368
20
2.0
20
85
0
55
39
9
17
34
1.82
143504--143568
17
3.6
19
72
18
57
58
0
0
41
0.98
144353--144406
15
3.8
15
72
20
53
51
0
1
46
1.11
144353--144393
16
2.6
16
81
11
50
53
0
2
43
1.13
144356--144406
14
3.6
15
75
19
56
52
0
1
45
1.12
150119--150159
20
2.0
22
85
9
59
34
17
29
19
1.94
151241--151273
14
2.3
15
89
5
50
60
0
0
39
0.97
151862--151931
11
6.0
11
69
12
50
65
2
1
30
1.15
153281--153350
34
2.1
34
100
0
140
31
11
8
48
1.69
170237--170385
23
6.4
23
77
9
115
44
20
22
11
1.83
170286--170377
46
2.0
46
86
0
130
43
21
21
13
1.86
170237--170385
69
2.1
66
82
11
174
44
20
22
11
1.83
174843--174944
23
4.3
23
77
6
98
44
19
21
14
1.87
179596--179640
22
2.0
24
86
8
67
37
2
2
57
1.23
188320--188391
32
2.2
32
82
0
81
45
15
12
26
1.81
189602--189647
15
3.2
15
75
12
51
43
6
0
50
1.28
190347--190446
45
2.2
45
87
7
141
58
1
8
33
1.34
190797--190832
17
2.1
17
90
10
56
27
2
0
69
1.02
193328--193380
26
2.0
26
96
0
97
32
16
28
22
1.96
193441--193474
16
2.1
16
94
0
59
26
17
17
38
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
209690--209749
30
2.0
30
100
0
120
46
13
10
30
1.75
210105--210137
16
2.1
16
94
0
57
51
18
12
18
1.76
217011--217039
6
4.8
6
100
0
58
17
0
0
82
0.66
220352--220423
32
2.3
31
80
9
74
37
1
6
54
1.36
221429--221905
204
2.3
204
90
2
724
31
16
24
27
1.97
223828--223860
14
2.3
15
90
10
52
57
0
3
39
1.14
223883--223955
32
2.2
33
85
7
96
34
0
8
57
1.28
224242--224305
32
2.0
32
100
0
128
18
40
3
37
1.67
231499--231559
31
2.0
31
90
0
95
34
11
9
44
1.74
231592--231632
20
2.0
20
100
0
82
29
19
21
29
1.98
241378--241409
12
2.7
12
95
0
55
43
3
40
12
1.58

Tables:   1

The End!