Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014923.1 Kokia drynarioides strain JFW-HI SEQ_129966, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66226

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4164--4225
29
2.1
30
88
8
92
38
4
22
33
1.76
5524--5548
12
2.1
12
100
0
50
32
0
24
44
1.54
6074--6099
2
13.0
2
100
0
52
50
0
0
50
1.00
11736--11775
21
1.9
21
85
10
55
27
10
15
47
1.77
16769--16819
24
2.2
24
86
6
79
64
0
7
27
1.21
24182--24221
21
2.0
20
85
14
55
22
0
2
75
0.93
29956--30004
22
2.3
22
85
3
64
30
0
4
65
1.11
30009--30235
104
2.2
105
93
0
384
31
7
11
50
1.65
30170--30205
18
2.0
18
88
0
54
41
0
5
52
1.24
33130--33184
22
2.5
22
96
0
101
45
16
5
32
1.70
35905--35930
13
2.0
13
100
0
52
0
38
0
61
0.96
36666--36713
18
2.7
18
90
6
71
50
18
8
22
1.74
37729--37815
30
2.9
30
78
10
81
36
5
22
34
1.78
49116--49155
3
13.3
3
100
0
80
32
0
0
67
0.91
50190--50218
14
2.0
15
93
6
51
20
27
27
24
1.99
51152--51226
23
3.2
23
63
10
62
33
5
10
50
1.60
51150--51244
47
2.0
47
100
0
190
30
6
10
52
1.60
52084--52128
22
2.0
22
87
8
65
31
4
2
62
1.27
52113--52213
47
2.1
47
82
7
116
36
6
13
42
1.72
54185--54307
25
4.8
25
77
10
99
31
23
17
26
1.97
54215--54305
25
3.6
25
85
5
119
29
25
19
25
1.99
54215--54315
52
1.9
52
87
0
148
31
23
18
25
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63025--63064
20
2.0
20
95
0
71
27
25
12
35
1.92

Tables:   1

The End!