Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014926.1 Kokia drynarioides strain JFW-HI SEQ_129969, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60011

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5247--5293
25
2.0
23
87
8
67
31
2
6
59
1.34
5672--5710
14
2.7
15
80
8
53
25
7
10
56
1.59
6361--6403
20
2.2
20
88
8
63
25
2
0
72
0.97
6391--6423
15
2.3
15
90
10
52
21
6
0
72
1.05
11888--11912
13
1.9
13
100
0
50
76
0
8
16
1.02
11943--11980
17
2.2
17
95
0
67
23
2
0
73
0.95
12349--12445
27
3.2
27
65
25
68
25
4
13
56
1.55
12340--12445
36
3.2
36
65
25
104
26
3
12
57
1.52
12334--12462
64
2.0
64
100
0
258
27
3
13
55
1.54
14494--14532
14
2.7
15
80
8
53
25
7
10
56
1.59
15813--15889
12
6.2
12
68
19
50
42
2
2
51
1.29
15836--15887
22
2.3
23
86
6
79
44
3
0
51
1.19
16512--16544
12
2.6
13
95
4
59
51
0
3
45
1.16
17626--17860
29
8.0
29
80
9
262
35
31
2
30
1.73
17626--17860
59
4.0
59
87
2
321
35
31
2
30
1.73
19018--19070
22
2.4
22
100
0
106
20
16
16
45
1.86
22588--22752
84
2.0
84
96
0
303
37
20
12
29
1.89
33872--33942
28
2.5
28
88
2
97
56
15
4
23
1.57
34212--34285
30
2.5
30
76
6
87
55
6
9
28
1.57
35885--35931
25
2.0
25
83
8
62
55
4
0
40
1.19
47474--47508
16
2.2
16
94
0
61
25
17
0
57
1.40
47666--47744
39
2.0
39
95
0
140
26
20
10
43
1.83

Tables:   1

The End!