Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014937.1 Kokia drynarioides strain JFW-HI SEQ_129980, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  98995

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1004--1051
25
2.0
25
87
4
71
39
2
0
58
1.10
2785--2848
25
2.6
25
78
14
69
9
7
4
78
1.09
2805--2841
12
2.9
14
80
19
53
10
10
0
78
0.97
12933--12985
16
3.3
16
76
10
54
15
32
3
49
1.62
23271--23310
20
2.0
20
85
0
53
42
20
7
30
1.79
39363--39394
2
16.0
2
100
0
64
50
0
50
0
1.00
41819--41865
17
2.7
18
80
9
62
55
0
6
38
1.26
41955--41994
18
2.4
17
87
8
55
35
20
2
42
1.65
43155--43199
23
1.9
24
86
4
65
55
15
11
17
1.68
47927--47959
13
2.4
14
85
10
50
42
0
0
57
0.98
47980--48018
19
2.0
19
85
5
51
33
0
5
61
1.18
49667--49707
20
2.0
20
85
0
55
53
0
2
43
1.13
54368--54402
2
18.0
2
88
5
54
45
0
2
51
1.16
66539--66593
27
2.0
27
89
0
83
49
3
1
45
1.30
68243--68312
28
2.4
29
80
4
88
38
8
2
50
1.48
68362--68448
43
2.0
45
86
4
124
36
13
6
42
1.72
68427--68511
31
2.8
31
77
13
88
30
10
8
50
1.66
74301--74370
28
2.4
29
80
4
88
38
8
2
50
1.48
74420--74506
43
2.0
45
86
4
124
36
13
6
42
1.72
74485--74569
31
2.8
31
77
13
88
30
10
8
50
1.66
81744--81789
23
2.0
24
91
4
76
36
0
4
58
1.18
82318--82358
20
2.0
21
86
9
59
43
7
2
46
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
82807--82873
23
3.0
23
83
10
70
50
1
2
44
1.26
82819--82873
23
2.4
24
85
8
71
52
1
3
41
1.29
86650--86699
25
2.0
26
88
4
75
54
2
0
44
1.11
86659--86711
25
2.1
25
82
0
61
58
3
0
37
1.16

Tables:   1

The End!