Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014939.1 Kokia drynarioides strain JFW-HI SEQ_129982, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76750

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
779--862
11
7.2
11
71
7
51
51
4
3
40
1.40
777--863
17
5.0
17
77
13
79
49
5
3
41
1.43
781--862
6
13.8
6
71
12
62
50
4
3
41
1.41
2332--2373
22
2.0
22
86
9
61
21
0
9
69
1.17
2687--2746
13
4.7
13
75
19
63
65
0
0
35
0.93
3402--3448
17
2.7
18
77
9
53
44
0
40
14
1.46
4360--4422
16
3.8
16
69
22
58
68
6
4
20
1.31
4630--4671
16
2.5
17
81
14
52
35
2
4
57
1.33
10863--10899
17
2.2
16
95
4
65
27
10
29
32
1.90
12520--12547
2
14.0
2
100
0
56
50
0
0
50
1.00
12653--12706
21
2.6
21
82
5
65
33
31
5
29
1.80
17350--17556
109
1.9
109
96
0
387
28
19
20
32
1.97
19941--19976
16
2.2
16
95
0
63
58
13
5
22
1.56
26847--26902
6
9.5
6
73
11
53
30
21
0
48
1.51
30095--30126
16
1.9
17
93
6
57
62
0
0
37
0.95
31655--31734
22
3.5
22
77
12
97
37
3
8
50
1.52
31640--31734
48
2.0
48
100
0
190
35
4
10
49
1.57
31640--31715
26
3.1
26
74
14
97
34
3
10
51
1.55
34256--34466
105
2.0
105
96
1
390
44
5
5
44
1.51
37437--37571
46
2.9
46
73
4
137
33
21
21
23
1.97
38106--38205
49
2.1
48
84
1
128
35
26
17
22
1.95
38744--38799
27
2.1
27
96
0
103
23
16
12
48
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39988--40124
46
3.0
46
84
0
184
36
24
18
21
1.95
40657--40754
48
2.1
47
82
5
117
44
23
11
20
1.83
42593--43440
214
4.0
214
89
1
1218
36
21
14
27
1.93
43464--44521
206
5.2
204
86
2
1329
38
15
13
32
1.86
43488--44521
203
5.1
204
85
3
1321
38
15
13
32
1.86
44807--44867
28
2.2
28
82
5
70
55
6
1
36
1.36
45960--46076
59
2.0
59
98
0
225
34
17
10
38
1.83
47126--47150
3
8.3
3
100
0
50
68
0
0
32
0.90
49397--49589
96
2.0
96
97
0
368
42
16
5
35
1.71
50383--50432
27
2.0
25
88
11
75
72
2
6
20
1.16
51026--51382
155
2.3
155
85
6
455
44
10
3
40
1.57
51082--51395
153
2.0
155
83
5
395
44
10
3
40
1.56
51861--51885
11
2.3
11
100
0
50
84
0
8
8
0.79
62748--62805
28
2.1
28
93
0
98
41
3
18
36
1.68
63173--63213
21
2.0
20
85
4
55
34
2
4
58
1.32
70514--70576
28
2.2
28
85
0
81
25
9
31
33
1.88
70678--71050
30
12.9
29
74
10
225
33
1
27
38
1.64
70678--71050
59
6.5
59
74
14
305
33
1
27
38
1.64
70787--70832
21
2.2
21
92
7
76
23
0
28
47
1.52
70780--70824
21
2.1
22
92
8
76
24
0
33
42
1.55
71955--72035
34
2.5
32
82
13
94
41
3
3
50
1.38
72599--72678
39
2.1
38
83
9
99
13
12
26
47
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72703--72778
18
4.4
17
81
5
80
51
2
1
44
1.23
72703--72796
36
2.7
35
83
5
100
52
4
1
42
1.28
73268--74023
206
3.7
206
89
1
1103
21
21
20
36
1.96

Tables:   1

The End!