Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014941.1 Kokia drynarioides strain JFW-HI SEQ_129984, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  135485

Tables:   1   

This is table  1  of  1  ( 69 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1170--1228
28
2.2
28
88
8
88
3
11
5
79
1.01
2092--2124
16
2.1
16
88
5
50
0
18
0
81
0.68
2796--3251
231
2.0
231
97
0
867
32
19
15
32
1.94
6573--6669
28
3.3
29
76
13
92
36
3
24
36
1.71
6583--6647
30
2.2
29
83
10
87
36
3
21
38
1.69
6635--6756
28
4.3
28
72
10
86
32
3
26
37
1.73
6635--7032
29
13.8
29
76
13
104
34
3
26
36
1.72
6818--7039
58
3.8
58
86
3
268
35
2
26
36
1.69
6653--6906
141
1.8
139
81
5
314
33
3
26
37
1.72
6793--7014
87
2.5
88
85
5
290
35
2
26
36
1.69
6817--7039
29
7.7
28
86
4
196
35
2
26
36
1.69
8752--8870
6
20.8
6
72
10
97
55
3
1
39
1.26
8753--8871
17
7.0
17
88
0
184
56
3
1
38
1.26
8753--8871
34
3.5
34
94
2
204
56
3
1
38
1.26
9184--9243
12
4.9
12
73
16
52
63
5
8
23
1.42
9387--9484
15
6.7
14
73
23
71
72
1
3
23
1.05
9391--9476
24
3.6
24
92
3
129
70
1
3
24
1.09
9387--9488
12
8.7
11
77
14
66
73
0
2
22
1.03
9387--9489
24
4.3
25
86
4
117
72
0
2
23
1.04
9547--9793
122
2.0
123
93
0
424
49
12
14
22
1.77
10990--11054
33
2.0
33
96
0
121
47
15
13
23
1.81
14722--14759
19
2.0
20
84
5
51
63
0
2
34
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14741--14820
40
2.0
40
81
13
94
65
1
3
30
1.18
14780--14907
18
6.8
18
66
23
59
62
2
7
28
1.33
15077--15170
19
4.8
19
70
11
64
23
4
5
67
1.30
15087--15174
10
8.8
10
71
9
63
27
3
3
65
1.24
15087--15215
30
4.5
30
71
16
94
29
2
2
65
1.17
15155--15225
26
2.6
27
86
8
99
35
1
0
63
1.03
24038--24131
23
4.1
22
86
10
111
10
25
22
41
1.86
24038--24131
46
2.0
46
86
11
131
10
25
22
41
1.86
24050--24205
23
6.9
22
80
9
95
12
23
25
39
1.89
25337--25366
2
15.0
2
100
0
60
50
0
0
50
1.00
30587--30625
2
19.5
2
100
0
78
0
0
48
51
1.00
34240--34270
2
16.0
2
93
6
55
48
0
0
51
1.00
40033--40334
164
1.8
164
89
0
469
23
16
14
45
1.84
43291--43324
6
5.8
6
93
6
61
14
32
0
52
1.42
43291--43324
11
2.9
12
91
8
61
14
32
0
52
1.42
48066--48115
26
2.0
26
84
4
66
36
10
24
30
1.88
55064--55106
15
2.9
15
82
6
52
32
2
0
65
1.06
55096--55121
5
5.2
5
100
0
52
19
0
0
80
0.71
55547--55591
19
2.2
21
84
7
58
64
2
6
26
1.30
55912--55974
30
2.2
30
82
5
76
55
6
14
23
1.62
56582--56627
20
2.2
21
77
11
51
58
6
6
28
1.48
70057--70173
39
3.0
39
97
0
216
36
10
21
31
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74196--74240
14
3.1
14
81
12
54
71
2
2
24
1.09
74363--74402
6
6.3
6
83
11
53
30
0
2
67
1.04
74388--74470
17
4.8
17
68
17
55
36
2
1
60
1.18
74373--74448
31
2.5
29
76
21
75
32
1
0
65
1.01
75169--75211
23
2.0
23
90
9
72
41
2
0
55
1.12
78912--79823
156
5.8
155
81
7
915
38
20
20
20
1.94
78912--79823
307
2.9
309
79
8
971
38
20
20
20
1.94
80875--80937
27
2.4
27
75
17
69
46
14
0
39
1.45
82362--82403
8
5.2
8
77
11
50
64
0
0
35
0.94
82362--82403
15
2.6
17
81
11
61
64
0
0
35
0.94
92804--92849
24
1.9
24
81
0
56
54
10
17
17
1.70
94398--94526
64
2.0
64
100
0
258
24
29
10
34
1.90
96436--96481
5
9.0
5
83
11
58
76
0
0
23
0.79
96421--96482
25
2.4
26
86
10
92
72
1
0
25
0.94
96420--96478
20
2.9
21
85
12
79
74
1
0
23
0.91
96436--96522
28
3.3
27
81
12
92
68
0
2
28
1.01
99336--99383
15
3.1
15
76
5
51
70
2
2
25
1.09
110898--110940
22
2.0
22
86
9
61
37
0
4
58
1.19
126055--126476
225
1.9
225
99
0
835
36
18
19
25
1.94
128296--128348
16
3.4
16
76
2
54
26
5
13
54
1.60
132116--132156
21
2.0
21
90
0
64
29
4
26
39
1.77
132222--132261
10
3.9
10
83
6
53
67
0
0
32
0.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
132368--132414
2
23.5
2
91
0
76
46
0
4
48
1.21
135089--135455
59
6.2
59
88
3
526
30
3
31
34
1.76
135089--135458
119
3.1
115
88
6
546
30
3
31
34
1.76

Tables:   1

The End!