Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014942.1 Kokia drynarioides strain JFW-HI SEQ_129985, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71876

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15014--15075
25
2.4
27
83
5
74
45
1
0
53
1.10
15035--15071
19
2.0
19
89
5
58
43
0
0
56
0.99
15026--15083
19
2.8
20
80
15
57
44
0
0
55
0.99
21977--22015
15
2.6
15
83
0
51
38
7
5
48
1.54
22755--22799
24
1.9
23
90
4
72
51
0
0
48
1.00
22770--22846
17
4.6
16
77
9
73
50
5
2
41
1.38
22771--22846
34
2.2
34
83
0
89
51
5
2
40
1.38
23336--24520
204
5.8
204
85
5
1454
20
22
20
36
1.95
23336--24260
409
2.3
408
90
1
1415
20
23
20
36
1.95
24055--24445
211
1.8
213
81
4
495
20
22
20
36
1.96
24946--24990
23
2.0
23
90
0
72
60
8
20
11
1.57
33081--33158
41
1.9
41
97
0
147
24
32
5
38
1.77
36130--36387
30
8.7
29
75
13
215
28
3
31
36
1.74
36136--36415
59
4.8
57
79
11
203
29
3
30
37
1.73
36136--36417
29
9.5
30
73
16
209
29
3
30
37
1.73
36207--36417
59
3.6
59
83
3
271
28
2
29
38
1.71
36167--36417
59
4.3
59
81
6
260
29
2
30
37
1.72
37417--37455
15
2.6
15
83
0
51
38
7
5
48
1.54
38184--38228
24
1.9
23
90
4
72
51
0
0
48
1.00
38199--38275
17
4.6
16
77
9
73
50
5
2
41
1.38
38200--38275
34
2.2
34
83
0
89
51
5
2
40
1.38
38964--38996
13
2.4
14
90
5
50
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38972--39019
20
2.4
20
78
0
60
50
0
0
50
1.00
42049--42079
10
3.0
10
90
9
53
29
0
0
70
0.87
42051--42079
11
2.7
11
94
5
51
27
0
0
72
0.85
42090--42154
20
3.4
19
85
6
78
38
0
6
55
1.25
45647--45688
17
2.5
17
96
0
75
28
9
38
23
1.86
46851--46904
12
4.7
12
86
6
76
74
1
1
22
1.02
46855--46921
6
11.3
6
78
9
66
74
1
4
19
1.07
46854--46921
23
3.0
22
87
8
91
73
1
4
20
1.08
46940--46965
12
2.2
12
100
0
52
7
7
0
84
0.77
48971--49020
20
2.5
21
81
15
61
72
0
4
24
1.02
48954--49019
6
10.7
6
73
10
53
74
0
3
22
0.96
50538--50617
23
3.4
24
84
5
85
40
15
11
33
1.82
50728--50775
24
2.0
24
87
0
69
47
12
14
25
1.79
61550--61574
7
3.6
7
100
0
50
24
0
0
76
0.80
63746--63818
29
2.5
29
86
4
103
20
36
23
19
1.95
66999--67182
42
4.3
42
81
8
201
35
10
27
26
1.90
66999--67182
86
2.2
86
83
4
228
35
10
27
26
1.90
71211--71263
28
1.9
27
84
3
70
41
1
7
49
1.42

Tables:   1

The End!