Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014943.1 Kokia drynarioides strain JFW-HI SEQ_129986, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61048

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4259--4288
15
1.9
16
93
6
53
70
13
6
10
1.34
5230--5319
31
3.0
30
76
9
85
38
0
7
53
1.30
5346--5394
25
2.0
25
84
7
66
46
0
6
46
1.27
10231--10269
20
2.0
20
84
0
51
69
2
0
28
1.02
17977--18014
2
19.0
2
100
0
76
50
0
0
50
1.00
18720--18765
24
1.9
24
82
8
58
50
2
10
36
1.50
26784--26808
1
25.0
1
100
0
50
0
0
0
100
0.00
37193--37219
6
4.5
6
100
0
54
18
48
0
33
1.49
39903--39941
15
2.5
16
87
4
62
38
0
0
61
0.96
48239--48273
17
2.0
17
88
5
52
54
8
8
28
1.60
50423--50501
16
4.6
16
76
16
79
67
1
1
30
1.07
50423--50506
8
9.9
8
75
12
69
66
1
1
30
1.07
50426--50473
7
6.1
7
80
17
51
66
2
2
29
1.14
50423--50503
17
4.7
17
77
11
85
66
1
1
30
1.07
50840--50878
10
3.5
11
89
10
53
76
0
23
0
0.78
58002--58075
29
2.3
33
82
15
86
48
6
2
41
1.44
58425--58460
18
2.0
18
88
0
54
50
0
0
50
1.00

Tables:   1

The End!