Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014944.1 Kokia drynarioides strain JFW-HI SEQ_129987, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53991

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2531--2585
29
1.9
28
85
3
74
41
14
9
34
1.77
3228--3279
23
2.3
23
82
0
59
7
21
21
50
1.73
3606--3647
19
2.2
19
91
0
66
14
2
2
80
0.90
3605--3682
30
2.6
29
78
10
75
15
3
3
76
1.07
18480--18763
52
5.5
52
90
0
417
27
14
24
34
1.94
18653--18734
26
3.2
26
62
19
62
28
9
23
39
1.86
18712--18841
62
2.1
63
82
7
158
31
16
22
29
1.96
21109--21143
18
1.9
18
88
0
52
34
8
0
57
1.29
30312--30369
21
2.8
21
75
10
57
36
6
0
56
1.26
30460--30519
32
1.9
32
83
10
79
30
1
5
63
1.25
35965--36003
2
19.5
2
100
0
78
48
0
0
51
1.00
40216--40277
22
2.9
22
78
2
72
4
4
19
70
1.23
40259--40301
18
2.2
21
80
19
58
4
0
18
76
0.95
40269--40354
24
3.3
24
78
18
77
6
3
16
73
1.19
40258--40345
45
2.0
44
82
6
106
5
4
18
71
1.23
40258--40351
20
3.8
25
72
21
74
6
4
17
72
1.22
48842--48873
12
2.7
12
90
0
55
6
43
0
50
1.27
53112--53140
6
5.0
6
95
4
51
34
48
0
17
1.47
53468--53507
21
2.0
21
85
5
55
65
0
0
35
0.93
53464--53524
29
2.2
28
82
5
70
63
0
1
34
1.04
53514--53564
20
2.6
20
81
3
68
52
1
5
39
1.37

Tables:   1

The End!