Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014945.1 Kokia drynarioides strain JFW-HI SEQ_129988, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  243659

Tables:   1   

This is table  1  of  1  ( 57 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19--90
7
10.3
7
80
5
56
44
47
2
5
1.41
136--183
14
3.4
14
83
11
62
31
56
0
12
1.37
244--299
15
3.8
15
70
13
53
37
46
3
12
1.59
1530--1563
13
2.6
13
85
0
50
52
5
14
26
1.64
4120--4156
12
3.0
12
88
4
56
18
8
24
48
1.75
4220--4312
25
3.7
25
68
20
68
11
5
20
62
1.48
4411--4461
25
2.0
25
84
0
66
13
3
27
54
1.56
4428--4488
25
2.4
25
81
7
70
16
6
21
55
1.63
10065--10097
2
16.5
2
93
0
57
48
0
51
0
1.00
11309--11342
17
1.9
18
88
5
52
47
0
2
50
1.16
11445--11497
22
2.4
23
90
9
92
20
0
33
45
1.52
21240--21274
18
1.9
18
88
0
52
48
17
8
25
1.75
21291--21341
22
2.4
22
87
6
70
29
17
0
52
1.45
21504--21562
29
2.1
28
84
6
75
18
45
0
35
1.50
21830--21874
18
2.6
18
74
19
51
35
0
4
60
1.17
29336--29360
11
2.3
11
100
0
50
0
8
0
92
0.40
31668--31791
62
2.0
62
100
0
248
48
14
9
27
1.75
34404--34541
23
5.9
22
72
15
98
12
25
20
42
1.87
34424--34533
25
4.6
24
77
13
93
11
26
20
40
1.87
34414--34542
48
2.7
46
80
9
141
13
24
20
41
1.88
42445--43078
314
2.0
315
95
0
1155
37
17
14
30
1.89
51298--51360
13
4.8
13
81
11
67
47
3
9
39
1.52
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51311--51360
26
1.9
26
88
8
75
48
2
10
40
1.48
51739--51779
20
2.0
21
86
9
59
29
4
7
58
1.46
54811--54839
6
4.8
6
100
0
58
13
34
0
51
1.42
63014--63043
15
2.0
15
93
0
51
43
26
16
13
1.85
68880--69357
235
2.0
238
88
3
719
40
15
18
25
1.90
78515--78545
6
5.2
6
92
0
53
32
3
48
16
1.62
92236--92269
6
5.3
6
86
13
50
20
0
0
79
0.73
96683--96713
16
1.9
16
93
0
53
22
6
0
70
1.09
98156--98322
52
3.2
52
85
0
217
29
18
19
31
1.96
98156--98342
52
3.6
51
79
5
178
29
17
19
33
1.95
101732--101949
75
2.9
75
93
1
357
43
15
28
12
1.83
103974--103998
2
12.5
2
100
0
50
48
0
0
52
1.00
105387--105430
17
2.6
17
81
0
61
50
0
0
50
1.00
105396--105462
9
7.1
9
76
20
66
55
0
0
44
0.99
105393--105462
20
3.7
19
87
9
90
57
0
0
42
0.99
105395--105462
28
2.4
29
86
13
90
55
0
0
44
0.99
108864--108928
31
2.1
31
88
0
94
35
7
10
46
1.68
111320--111371
23
2.3
22
93
3
86
11
23
30
34
1.90
114672--114715
22
2.1
20
83
8
52
25
0
2
72
0.96
144664--144694
6
5.2
6
100
0
62
0
67
0
32
0.91
145600--145674
31
2.4
31
91
4
116
28
16
12
44
1.83
148840--148911
8
8.8
8
73
20
60
37
1
0
61
1.05
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
148955--149013
19
3.1
19
82
7
75
38
0
5
55
1.22
148955--149013
20
3.0
20
82
7
77
38
0
5
55
1.22
169710--169741
2
16.0
2
100
0
64
50
0
0
50
1.00
180103--180137
15
2.3
15
90
9
54
0
37
0
62
0.95
187061--187090
2
15.0
2
100
0
60
50
0
0
50
1.00
194187--194227
21
2.0
21
85
9
57
39
0
2
58
1.11
196365--196397
16
2.0
17
88
5
50
15
0
6
78
0.93
209237--209311
31
2.4
31
77
2
87
28
17
9
45
1.79
209511--209680
59
2.9
59
82
3
200
47
12
15
24
1.79
209775--209833
27
2.1
28
78
12
68
33
10
1
54
1.44
209785--209839
27
2.0
27
86
6
76
34
10
1
52
1.47
213767--213921
82
1.9
81
90
1
247
40
9
10
40
1.71
220696--220749
6
9.0
6
100
0
108
16
0
50
33
1.46

Tables:   1

The End!