Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014947.1 Kokia drynarioides strain JFW-HI SEQ_129990, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  115107

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8391--8440
22
2.2
22
80
13
57
68
10
8
14
1.40
11613--11655
21
2.1
21
86
4
61
46
0
9
44
1.35
12104--12269
81
2.0
81
94
0
287
40
6
8
45
1.59
12139--12307
81
2.1
81
86
2
232
43
6
7
42
1.59
15486--15535
22
2.2
22
80
13
57
68
10
8
14
1.40
25752--25781
2
15.0
2
92
0
51
46
0
3
50
1.18
27654--27703
27
1.9
25
84
8
64
24
16
4
56
1.57
28685--28718
16
2.1
16
94
0
59
61
5
0
32
1.20
30195--30258
28
2.2
29
89
8
96
28
3
3
65
1.23
33635--33668
15
2.2
16
89
5
52
29
8
5
55
1.54
33849--33906
29
2.0
29
86
6
82
37
0
5
56
1.21
33936--33999
26
2.3
28
80
17
71
34
7
3
54
1.45
48783--48810
3
9.3
3
100
0
56
32
0
0
67
0.91
50277--50328
20
2.6
20
77
17
54
34
5
0
59
1.21
50470--50495
13
2.0
13
100
0
52
30
0
23
46
1.53
52467--52512
18
2.6
17
80
6
56
43
4
0
52
1.21
52919--52997
38
2.1
37
82
13
92
48
3
3
44
1.39
52909--52997
37
2.4
36
80
14
92
48
4
4
42
1.43
53213--53261
23
2.0
24
84
7
64
28
2
4
65
1.22
54800--54826
7
3.9
7
100
0
54
25
29
14
29
1.95
61467--61501
2
17.5
2
100
0
70
48
0
51
0
1.00
64010--64066
27
2.1
28
96
3
107
66
3
12
17
1.37
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
80342--80925
198
2.9
198
85
6
777
41
9
13
34
1.77
81183--81313
56
2.3
56
85
2
183
28
23
25
22
1.99
81514--81560
22
2.1
22
100
0
94
36
34
12
17
1.87
86501--86551
20
2.6
20
76
17
54
56
0
1
41
1.10
90409--90438
2
15.0
2
100
0
60
50
0
50
0
1.00
90774--90816
20
2.2
20
83
8
52
53
0
0
46
1.00
92803--92830
3
9.3
3
100
0
56
32
0
0
67
0.91
92963--92998
2
18.0
2
100
0
72
50
0
0
50
1.00
93705--93764
22
2.8
22
87
7
79
71
1
11
15
1.22
93730--93759
15
1.9
16
93
6
53
70
0
13
16
1.18
94529--94558
14
2.1
14
93
0
51
73
3
6
16
1.18
94560--94602
19
2.3
19
84
8
52
58
4
0
37
1.19
95087--95117
16
1.9
16
93
0
53
29
12
9
48
1.73
100340--100387
24
2.0
24
83
0
60
66
2
2
29
1.14
100712--100741
15
2.1
15
93
6
53
33
0
0
66
0.92
110746--110845
23
4.3
23
90
0
164
13
23
24
40
1.89
111966--112048
42
1.9
44
95
4
152
43
4
26
25
1.74

Tables:   1

The End!